Chr:
Chr4
Start:
23360236
End:
23361335
Strand:
+
Ref_name:
OSA-LNCN4671
Sequence
(OSA-LNCN4671.1):
GGUGCUUCAAAUGUACUAGAAGUACCUUCACUUUCAGAAAUAUCAAAGGUUGAGAUGUUUUACGUGUUCUUGAAAUGUACUAGAGGUGCCUACACUUUAGAGCGAUAAAUGGCUGAUAUUUCUUCAAAGUGGAAGUAACUCUAGUAACUUGCAAGGACCGUAAAACAUCUCAUCAAAUUAUUAAAAAAAUGCAAACCUGCCAUACCAAAACUCUCUCCAGAAGGGAUAUGGAGAGUUAUAGUUUAUAAAAGAAAUUUGCCUUUCUAGAGAGCACUCAUUCAAUAACCAUUCUAGGUUUUCUGAGUUCCUGAUCAAUUUUUCUUGGGUGUUGUCUUACUCCGUGCUCUGUGAGCAUAAUUGUUGAAUACCAGUUAACUUCUCAGCAAUCUUCUAAAGUAAAACAGUACAUAUCUGCAGAAUUUUGCCAAACCUUUCUCGAUACAAAGCCAAUAUUGGAGUUUUCCUAAUAAGAAAAGGAGCGCUUGAAUUCAAUAGUUGCAAUCACCAACCCAAUCUGUAAGACUGUAAGUCUGUAACCCCAAAUCUUAUACAACAAUCGCAGCUUCUUAAUAGGCUAAGUCAAGAAUGGCACCCCUUGUGUCAAGAAGCUCACCAGGUGCUAUGUCCGGCACAAGUACUAACAGUAUAAUCACUGUAACCUACCAAUCACGAAUGCAUCAAAAUGCAACCACCGGCAGCUAAAAUUAUCGGUGAACUGCAAGCUACUACUGCACGGAAGCUGCAAAACCGAAACCAAUUCACAAUGUGCUAGUGUUAAACGCGUGUUAUAUUAUUAGGUUCUAGUUCAACUAGUGGAUUCGAACAGAAAGGCAAUUAGCAAGCUACUACAGCACGGAAGCUGCAAAACCGAAACCAAUUCACAAUGUGCUAGUGUUAAACCCGUGUUAUAUUAUUAGGUUCUAGUUCAACUAGUGGAUUCGAACAGGAAGGGAUCGGGGGGAGAGGUGAGGGAGAACUGCG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
27.64%
ME_num:
MEP:
72.15%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.72
Avg Expression:
2.57
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | -1.38346618940077 | 0.00526283544067638 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | -1.80941907200154 | 0.000307792433501199 |
3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -1.96484090748286 | 5.82783251837367e-05 |
4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -1.34367251213516 | 0.0315053714494076 |
5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | -1.96945963124661 | 0.000988405991798699 |
6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | -1.1821224989341 | 0.0241590484992836 |
7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | -1.75421482311869 | 0.000109656782887774 |
8 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -1.36693604742094 | 0.00249090825943296 |
9 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -1.51748534215919 | 0.000322800927211739 |
10 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA | -1.45052667184639 | 0.00478299426147192 |
11 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -1.39703702059096 | 0.00045099083980557 |