Chr:
Chr4
Start:
22812218
End:
22815246
Strand:
+
Ref_name:
OSA-LNCN4656
Sequence
(OSA-LNCN4656.1):
GCGCUGCUGUGAGCUAAGCUGAAGAGGUGACAACAAGUUGAACGAGACAAUUAGCGAUGUGAGAUGCGAAAGAUUAUUCCAGAACAGAUCACAAGCAGGCCUGUGACAAUCAUGUGACGCACAAGGAGAGAGUAUGGGAAGUAAAGUCAAACAAACGAGUACAUGAUGAGCAUUUUUAGACGGAUUUAGGACUUGACGAGUGGUCUAAAAACCUGAUAAAUCAGAACAAGCACAUAAACUAGAGGACGUGCUCAGUGCUCAGCUCAGCUCUCCUCCUCGGCGGCGGCGGUGGCCGUGCUGAUCUUGCCGCAGAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
23.17%
ME_num:
MEP:
66.06%
HE_num:
HEP:
10.57%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.98
Avg Expression:
120.84
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -1.57375684902055 | 4.36564772238333e-07 |