Chr:
Chr4
Start:
11452185
End:
11452932
Strand:
-
Ref_name:
OSA-LNCN4378
Sequence
(OSA-LNCN4378.1):
CCCCUUCACGUCAUGUAUGUAUGAAUGUGCACGUACGUACUUAUGUAUCUCUCUCUCUCCCCCCUUACUUUCUCUCCUUUAUUAACAACAUCUUAACUAAUAUAAAUAUUCGGAUUUUUCCUUUAGUCACCAAUUUUUUCGUCCGUGCGUAAUUUUUUUCGCCCGUACAUGCUUUUUUCACGGAUCCGAUUUUGUUCGGUUUUUCACUUUUCUCUAGCGCCAGCCCAGUAGGCCAGGCCAGAAGUCCAAGCCACAAGCCCAUAAAGCUACAAGUCCAGGUGCGCCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCACAAGCCCACAAGCCCAGGUGCACCCCCACUCCUACUCCGGUUUGCCCCAACUGCGACCAGGAGUCCUGCUCUUGCUAUUCCGUUUUCCUUUUCUUCUUUCUUCCACUAUUUUUAGCGCUCACCCGAUCACGAUUUUACAGAUUUCUCAGGCAAGACAUACAUAUAGAAAUAAUAGAAGCACACAAAAAAAAUACAAAUCACAAGGUUUUUCCUCUAGGGUGCCAAGCCACCUCCAAUCAAUGUC
Sequence
(OSA-LNCN4378.2):
CCCCUUCACGUCAUGUAUGUAUGAAUGUGCACGUACGUACUUAUGUAUCUCUCUCUCUCCCCCCUUACUUUCUCUCCUUUAUUAACAACAUCUUAACUAAUAUAAAUAUUCGGAUUUUUCCUUUAGUCACCAAUUUUUUCGUCCGUGCGUAAUUUUUUUCGCCCGUACAUGCUUUUUUCACGGAUCCGAUUUUGUUCGGUUUUUCACUUUUCUCUAGCGCCAGCCCAGUAGGCCAGGCCAGAAGUCCAAGCCACAAGCCCAUAAAGCUACAAGUCCAGGUGCGCCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCACAAGCCCACAAGCCCAGGUGCACCCCCACUCCUACUCCGGUUUGCCCCAACUGCGACCAGGAGUCCUGCUCUUGCUAUUCCGUUUUCCUUUUCUUCUUUCUUCCACUAUUUUUAGCGCUCACCCGAUCACGAUUUUACAGAUUUCUCAGGCAAGACAUACAUAUAGAAAUAAUAGAAGCA
Sequence
(OSA-LNCN4378.3):
CCCCUUCACGUCAUGUAUGUAUGAAUGUGCACGUACGUACUUAUGUAUCUCUCUCUCUCCCCCCUUACUUUCUCUCCUUUAUUAACAACAUCUUAACUAAUAUAAAUAUUCGGAUUUUUCCUUUAGUCACCAAUUUUUUCGUCCGUGCGUAAUUUUUUUCGCCCGUACAUGCUUUUUUCACGGAUCCGAUUUUGUUCGGUUUUUCACUUUUCUCUAGCGCCAGCCCAGUAGGCCAGGCCAGAAGUCCAAGCCACAAGCCCAUAAAGCUACAAGUCCAGGUGCGCCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCACAAGCCCACAAGCCCAGGUGCACCCCCACUCCUACUCCGGUUUGCCCCAACUGCGACCAGGAGUCCUGCUCUUGCUAUUCCGUUUUCCUUUUCUUCUUUCUUCCACUAUUUUUAGCGCUCACCCGAUCACGAUUUUACAGAUUUCUCAGGCAAGACAUACAUAUAGAAAUAAUAGAAGCA
Sequence
(OSA-LNCN4378.4):
CCCCUUCACGUCAUGUAUGUAUGAAUGUGCACGUACGUACUUAUGUAUCUCUCUCUCUCCCCCCUUACUUUCUCUCCUUUAUUAACAACAUCUUAACUAAUAUAAAUAUUCGGAUUUUUCCUUUAGUCACCAAUUUUUUCGUCCGUGCGUAAUUUUUUUCGCCCGUACAUGCUUUUUUCACGGAUCCGAUUUUGUUCGGUUUUUCACUUUUCUCUAGCGCCAGCCCAGUAGGCCAGGCCAGAAGUCCAAGCCACAAGCCCAUAAAGCUACAAGUCCAGGUGCGCCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCUCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCACAAGCCCACAAGCCCAGGUGCACCCCCACUCCUACUCCGGUUUGCCCCAACUGCGACCAGGAGUCCUGCUCUUGCUAUUCCGUUUUCCUUUUCUUCUUUCUUCCACUAUUUUUAGCGCUCACCCGAUCACGAUUUUACAGAUUUCUCAGGCAAGAC
Sequence
(OSA-LNCN4378.5):
CCCCUUCACGUCAUGUAUGUAUGAAUGUGCACGUACGUACUUAUGUAUCUCUCUCUCUCCCCCCUUACUUUCUCUCCUUUAUUAACAACAUCUUAACUAAUAUAAAUAUUCGGAUUUUUCCUUUAGUCACCAAUUUUUUCGUCCGUGCGUAAUUUUUUUCGCCCGUACAUGCUUUUUUCACGGAUCCGAUUUUGUUCGGUUUUUCACUUUUCUCUAGCGCCAGCCCAGUAGGCCAGGCCAGAAGUCCAAGCCACAAGCCCAUAAAGCUACAAGUCCAGGUGCGCCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCACAAGCCCACAAGCCCAGGUGCACCCCCACUCCUACUCCGGUUUGCCCCAACUGCGACCAGGAGUCCUGCUCUUGCUAUUCCGUUUUCCUUUUCUUCUUUCUUCCACUAUUUUUAGCGCUCACCCGAUCACG
Sequence
(OSA-LNCN4378.6):
CCCCUUCACGUCAUGUAUGUAUGAAUGUGCACGUACGUACUUAUGUAUCUCUCUCUCUCCCCCCUUACUUUCUCUCCUUUAUUAACAACAUCUUAACUAAUAUAAAUAUUCGGAUUUUUCCUUUAGUCACCAAUUUUUUCGUCCGUGCGUAAUUUUUUUCGCCCGUACAUGCUUUUUUCACGGAUCCGAUUUUGUUCGGUUUUUCACUUUUCUCUAGCGCCAGCCCAGUAGGCCAGGCCAGAAGUCCAAGCCACAAGCCCAUAAAGCUACAAGUCCAGGUGCGCCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCACAAGCCCACAAGCCCAGGUGCACCCCCACUCCUACUCCGGUUUGCCCCAACUGCGACCAGGAGUCCUGCUCUUGCUAUUCCGUUUUCCUUUUCUUCUUUCUUCCACUAUUUUUAGCGCUCACCCG
Sequence
(OSA-LNCN4378.7):
CCCCUUCACGUCAUGUAUGUAUGAAUGUGCACGUACGUACUUAUGUAUCUCUCUCUCUCCCCCCUUACUUUCUCUCCUUUAUUAACAACAUCUUAACUAAUAUAAAUAUUCGGAUUUUUCCUUUAGUCACCAAUUUUUUCGUCCGUGCGUAAUUUUUUUCGCCCGUACAUGCUUUUUUCACGGAUCCGAUUUUGUUCGGUUUUUCACUUUUCUCUAGCGCCAGCCCAGUAGGCCAGGCCAGAAGUCCAAGCCACAAGCCCAUAAAGCUACAAGUCCAGGUGCGCCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCUCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCACAAGCCCACAAGCCCAGGUGCACCCCCACUCCUACUCCGGUUUGCCCCAACUGCGACCAGGAGUCCUGCUCUUGCUAUUCCGUUUUCCUUUUCUUCUUUCUUCCACUAUUUUUAGCGCUCAC
Sequence
(OSA-LNCN4378.8):
CCCCUUCACGUCAUGUAUGUAUGAAUGUGCACGUACGUACUUAUGUAUCUCUCUCUCUCCCCCCUUACUUUCUCUCCUUUAUUAACAACAUCUUAACUAAUAUAAAUAUUCGGAUUUUUCCUUUAGUCACCAAUUUUUUCGUCCGUGCGUAAUUUUUUUCGCCCGUACAUGCUUUUUUCACGGAUCCGAUUUUGUUCGGUUUUUCACUUUUCUCUAGCGCCAGCCCAGUAGGCCAGGCCAGAAGUCCAAGCCACAAGCCCAUAAAGCUACAAGUCCAGGUGCGCCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCACAAGCCCACAAGCCCAGGUGCACCCCCACUCCUACUCCGGUUUGCCCCAACUGCGACCAGGAGUCCUGCUCUUGCUAUUCCGUUUUCCUUUUCUUCUUUCUUCCACUAUUUUUAGC
Sequence
(OSA-LNCN4378.9):
CCCCUUCACGUCAUGUAUGUAUGAAUGUGCACGUACGUACUUAUGUAUCUCUCUCUCUCCCCCCUUACUUUCUCUCCUUUAUUAACAACAUCUUAACUAAUAUAAAUAUUCGGAUUUUUCCUUUAGUCACCAAUUUUUUCGUCCGUGCGUAAUUUUUUUCGCCCGUACAUGCUUUUUUCACGGAUCCGAUUUUGUUCGGUUUUUCACUUUUCUCUAGCGCCAGCCCAGUAGGCCAGGCCAGAAGUCCAAGCCACAAGCCCAUAAAGCUACAAGUCCAGGUGCGCCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGUUCCACAAACCCACAAGUCCAGGUCCAAGCCACAAGCCCAUAGAGCCACAAGUCCAGGUGCACCACAAGCCCACAAGCCCAGGUGCACCCCCACUCCUACUCCGGUUUGCCCCAACUGCGACCAGGAGUCCUGCUCUUGCUAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
34.76%
ME_num:
MEP:
56.91%
HE_num:
HEP:
8.13%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
panicle
Tau :
0.77
Avg Expression:
7.05
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
Tip: OSA-LNCN4378 is not a differential expression ncRNA. |