Chr:
Chr4
Start:
3178342
End:
3185090
Strand:
+
Ref_name:
OSA-LNCN4209
Sequence
(OSA-LNCN4209.1):
UUAUGGGAUGCCUCUGGCUAAGUAAAUUGUUAUCACAUGGGAGUUGGUGUGCCAAUGGUUGUGGAAUGCCGAGGAUGAGGAGACGAAGUGUUACACAUUUAUUUGCCCAUCAUGGGUGUCUUUUUGCCUCUAUUGUGGCGUGGUACCAGUAGGAGUAGGAGGCAUCCUCGGUAUUUCCUGAGUGGAUGACGGCUGUCAUUGCCUGAUACUCGGCUAUGGAUCUUAGCCCAACUAGGUGGCAUGCGAUUUUCAUGGGUUAGAUUUGGAAAGGCCUUAUCACGAACUUCCGGUACCGGCCAAUACCGGUGUAAGUUUCGUGUCGUGUGGGUAAAGCGUGCAACCUCUGCAGAGAUUAAUGAACUAUUCGAACAGCCGUGCCCACGGUCAAGGGCGAGUGUAAGGUGUUUCUCAUAGCGUAGAUUUGUUUGACAAAUGUUUGUGAAGAAGUGAUUAUUGGGAAGGGUAACGUUUCCAGAGUCCGCCUGUGUGGCAGACUGCUAACCUGGGUGGUUAGGAAAGGGUCUGUGUGACCUAGGGUGUCGUCCGACACCGAGGUGUUGUUAGGGCCAUGAUGAUGGCGUUGUUGUGCUGAGAUAUCUGUGUGGACUAUGUGUUGUUGUGAGAAGAAGCUAAUAGAGGAAACAAAUUAAUUGUUGUUCGUUAAUCGUGACAAGUUGUUGCAAAGCAACUUGUGGAAUGGGUCGAGGCGUGAGCCUCCUCCCGACAACUAAAAACUUGACUCACUCACUAGGAGUUUUGUGAAAUAAAUCACUUUGCCAAAAAGGCAGCUUUCACAAAUAAAACCUUAGCCUCCUUAUUUAAGCCAAACAUGUCAUUCUUUCCCCUGGCUUGCUGAGUACGUUAAAGUACUCACCCUUGCCCCUUAUAAUAAUAUAUAGAGUUUGAAGAUGAAGACGUCGACCCGACCGCCGAGGAGUAUCUCCAGGAGCAAGCCGAGUAUGAAGACUUCUAGAUGUUUCGUGCCUAGCCCCAAGCCUCGCCUGUGGGAUAAGUUAGUUGCCUAGGUUCUUUGCCUAGUGCGUAGUCGCUUAGUUCUCCGUGCUGUUCGCUUCUGCGCCGUCGCUUUUAUGUUUUUCUGUGUUGUUGUGUUGCUCAUCUAUGAGCCUGUCCAUGAUAGCAACUUAUGUAAGGACU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
94.92%
ME_num:
MEP:
4.88%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.96
Avg Expression:
1.22
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | -5.88940934183959 | 0.00601788932346715 |
2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | -7.03174322020722 | 0.0032876894766918 |
3 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 1.04840671606945 | 7.96636939306476e-06 |