Chr:
Chr3
Start:
7950042
End:
7950703
Strand:
+
Ref_name:
OSA-LNCN3568
Sequence
(OSA-LNCN3568.1):
GCGCGCACCAUCUCCCACUCCGCCCGCUCCUCCACCUCCCUCUCUCCCACUCCACUCCUCUCCUCCUCUCCUCCCACUCUCCUCUCCUCUCUUCCCCUCUCUCUUGGCCGGCCGGCGGCGCGACAACAUGCGGCCGGCGCGCGACCCCUCCCUCUCCCUCGACUGCGGGAGCAAGCGGCGGCGGGCGACCACGGCGGCCCCUCCUCCCCUCCCUCCCCUCCCCUUGAAGAUCCAGCAGAGGGGAGGCAUGGGGGUGGUGGAUCCAACGGUGCGCGCCCCUCCCCUCCUUCCCCUUGCAGAUCCGGUGGCACGCGGCCCCUCCCCUCCCUCCCCUUGCAGAUCCGGCAGAGGGGGCGGUGGAUCUGGCGACGCGUGACCCCUCCCCUCCCUCCCCUUGCAAAUCCGGCGGAGGGGAGGCAUGCAUGGGGGCCCGGCGGAGCAGCGGCAUGCGUCAGCGGUCGGCGUGGAGAUGGGGUGAUGGCGUCGGCGAUCGGCGGAUCUAUCUCUCCCCCUCCUUCUCUCUUUGUUAUCCUCUUUGUUAUUUGUGAUUCUUUGUGGUUUGUGAGAUGCAUUUUUGGAGUUCAUUUGUUGCUGUGAGAUGUGUUCUUGUGAUGUGACAGUUCAUUUGUUGAUGUGAGAUGUGUUCUUGUGAUGUGAGAUCA
Sequence
(OSA-LNCN3568.2):
CUCCUCUCCUCCCACUCUCCUCUCCUCUCUUCCCCUCUCUCUUGGCCGGCCGGCGGCGCGACAACAUGCGGCCGGCGCGCGACCCCUCCCUCUCCCUCGACUGCGGGAGCAAGCGGCGGCGGGCGACCACGGCGGCCCCUCCUCCCCUCCCUCCCCUCCCCUUGAAGAUCCAGCAGAGGGGAGGCAUGGGGGUGGUGGAUCCAACGAUCCGGCAGAGGGGGCGGUGGAUCUGGCGACGCGUGACCCCUCCCCUCCCUCCCCUUGCAAAUCCGGCGGAGGGGAGGCAUGCAUGGGGGCCCGGCGGAGCAGCGGCAUGCGUCAGCGGUCGGCGUGGAGAUGGGGUGAUGGCGUCGGCGAUCGGCGGAUCUAUCUCUCCCCCUCCUUCUCUCUUUGUUAUCCUCUUUGUUAUUUGUGAUUCUUUGUGGUUUGUGAGAUGCAUUUUUGGAGUUCAUUUGUUGCUGUGAGAUGUGUUCUUGUGAUGUGACAGUUCAUUUGUUGAUGUGAGAUGUGUUCUUGUGAUGUGAGAUCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
91.46%
ME_num:
MEP:
7.52%
HE_num:
HEP:
0.81%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.88
Avg Expression:
1.95
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 5.74828139500218 | 7.09893017334552e-05 |