Chr:
Chr3
Start:
7175743
End:
7176541
Strand:
-
Ref_name:
OSA-LNCN3554
Sequence
(OSA-LNCN3554.1):
CGUAGAAUAGCCGCAAAAACUUAAUGCAGGUUUUGUUUCACGCCACGUUCGGUGGUAGUGGAAGCUGGCUUUGUGCCUGGCGUGGGUGUUAGCACAUUAGGUUUCAACUUGUAUGCCCUCUAGAAAGGCUUUUAAGUCAGUAAAUUUGAUUGAUAUCGAUGUCCACUCACAUUCUUAUACGAUCAGUGUAGUGUACUCGUGUAUGUGACUGUGUUUUGGUGUUUGAUAAGUUCGAACCGUUAUCCAUAUCGGUGCUCUAUAGGCAAUGUUGGAGCCAACAAUGCCGUCAAGCUCACUUCACGAAUAACGUUUUUGGUGGCCGAUUGUUUUUUUAAUAAUGUUUAUUAUUGUGGCGAAGAUCAAGCGGUUGCCUGACCAUAUAACCUGAUAAUUGCUCCGCCAUUGAAUAUGGGGCUGAGCAUGCUUUUCUAUUGUGAUCUCUUUCUUCUUAACCAUAUAUGCUGGAUUUUAUAGUCCCUUACAAUCAGGAGACGAUGGUCGCUAGCUAGCAAACUUGUGGGGAAGGCCGGGUUGCCCAAGAGGUUGAAGUCACCUGUGAGGGCUUGUUCGGAUCACAUAAUAGGAAAAAUAUAGGAAUAAAAAAAACACAGGAAUAAUAUAGGAUUGCUUAUGUAAGAUGUAGGAUUGAAAAACGAAGGAAUUUGAUGGUAAGAAGCAUUCGGAAUACAGGAAUAUAUAAAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
95.33%
ME_num:
MEP:
4.47%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.97
Avg Expression:
0.95
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hN | 4.10753528264997 | 0.0139449318314136 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hA | 3.63904295401094 | 0.0375534574884697 |