Chr:
Chr3
Start:
5819689
End:
5820403
Strand:
-
Ref_name:
OSA-LNCN3525
Sequence
(OSA-LNCN3525.1):
GUGAAACGAAUGAAAUAUGCGAUUCGGUCCAUUUGGAAGUAUCAAAAUUGCACAGAGUAAUAUGUCAUGAAAGUUGAACAUCAUGUAUUUAAAUGCUACCGUGGGCUAACUAGGUACGAUUUUACAAACACCAAAAAAUAGGAACUGCAGAAAUUUAGGCAUGCUUUAUCCUUAAUGUUAGCAUGAUGAAUGGGUGAGGAAACAAGAAGCUAUAUGUAUACUGUAUGUUUUAGCAUACGUGUUAUUCUGAAUCAUGGUAACAGAAACAUUGGAAACCGGAAAACGUCAAACAGACGUAGAAAACAUUAGUUACGGUUCGCUGGGCUUUCAGGACAAAGGCAGAAUCAUAGGAAUCACUUGCCUUAACCAAUCAAAAUAUUUUUUCAUAUUGGCAGCAAAAAUAUAAGAGCUUGUUUAGUGUUUUCAUUUUCUUUGUUUCUCUGCGUGGAAUAAUGGUACUGCAAUCUACAACAUGCUUACACCUAGGAACAGGAAUUUUUGCCCUAACCAAGCAGGGGUCAGAGUGCCACUAAUUCUGUUAAUCAUGCUUUAGGUACCAGCAUGGUAGACUAACGCAUGCUAAGCAAUGAGAAAUCCCAUUUUUUUUGGCCAUCUGAACAGAAGUAUAAAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
40.24%
ME_num:
MEP:
59.55%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.69
Avg Expression:
1.31
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 1.41224927632143 | 0.0396963037032184 |
| 2 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA) | 6.40366567917892 | 0.0330190156517023 |
| 3 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -3.32710778500707 | 0.0187986576539635 |