Chr:
Chr3
Start:
3381832
End:
3382479
Strand:
-
Ref_name:
OSA-LNCN3473
Sequence
(OSA-LNCN3473.1):
CUUUCGGGAUGAGGUUAUUGUGCUAUUACUCAUCGAUCGAGUACAAUUAAGCCGUGUGGAUUCCUUCUUUCACCAAUCAUCGACCGAGCAUUACAUGGGAAGCAAGCAAAGAGAGAGGCCGCAGAGGAUCGACAAAGCACUCCGCUUCACAAGCUAAACCCAUCAGCAUGACGAUGCCGGAGACGUUGAAGCUGCAAAAUAUCAAAGCCGCUCCAUGUCAACACACUUCAGAGUUCAGAUCAAGCUACUGUCACUGCGGUUCCCGGUAUCUUGUUCUGCAAAACUGGAAAGGCCCAGCAAAUUGCACACCCGCUCCACGUGAAAUUACAGGAACCGGAUAGGAAAUCAACAAGAAAUAACUUGAUGAAAUGCAAAUAUACGU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
80.89%
ME_num:
MEP:
17.89%
HE_num:
HEP:
1.02%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.94
Avg Expression:
5.27
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -3.23882151662301 | 0.0177761556259205 |