Chr:
Chr3
Start:
863479
End:
864248
Strand:
.
Ref_name:
OSA-LNCN3433
Sequence
(OSA-LNCN3433.1):
CUUCUUCUCAAUCUUCUCCUUAUCUUUCGGAGCAGCAGCUAAGCUAAGCUUUGGCAGUAUCGUCGUUGAUCCACGUAGCUAAUUACCAACCGUUAACUGAUCCAGACAACAAAAAGGACGGCUGCAUGCAUCCACGUCCUUGGUUCAGUCACCAGUGAGAUCCAAUUAUAAGUUAUCAUUCAGAGAGUCCAGACAAUCGACUACCUUUCUCUGUUAAGCUUGCUGUUACCAAUUCCAUGCGAUGAACAAUCGAAAAGUACAGUGUCUUUUUUUUCGCGAACGCGAAAAGUACAGUGUCGAGUGUUGCAUUCAUAAAUUAUUAUACUUUCUUCAGGUACAGAUACUAACACGUAAGGCCAGACUAUUCCUCACCGAUCGAUAUCUCCUAGUCACAACUCAAAAGGUACAAAUGUCAUCAUCCCUCGUAUGUACAGCACAAUCUAGGUGUUCAAUCUUUGAAAGUGAGAUUACCAAAGUGACAGGAGUAUACAUUCGUAUUCGAACCCCAAAAAAUGAAUGAUAUAUAGCUAGAUCGACACUUCGACAGAGACUGUGCAUCCAUGGAUGGCCCUCACUCAGGCCACCGGCAGCUAGCUACCUCGUCGAUCGACUACUUAUUAAGCUAUAAUUUCUCUCAGUUUGAGCUUCACGCUGCUAGAUUCCAAAUCCAAUGGCAUAUAGAGAAGCAUCUCACUGCAAGCAUGGAGGCAACCACUGAGUAGUUGCAGCUAGCAGCAGGGAGGAAGAAGAAUAUACAACUAGCCCAUGCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
93.29%
ME_num:
MEP:
6.5%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
coleoptile
Tau :
0.93
Avg Expression:
1.00
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 5.2221714620951 | 0.000825641125137432 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | 4.459238556688 | 0.00826776895927313 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 6.79404588544996 | 1.93550527259229e-07 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | 6.92145089994168 | 2.54618843440366e-07 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | 4.36685233303199 | 0.0186716693488125 |
| 6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | 3.86675763199168 | 0.0357441551923955 |
| 7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | 3.93673783892067 | 0.0295483751809081 |
| 8 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | 5.23034346265112 | 0.000349665118270522 |