Chr:
Chr2
Start:
35884646
End:
35885110
Strand:
-
Ref_name:
OSA-LNCN3414
Sequence
(OSA-LNCN3414.1):
GCCACCGCAAUGGAGCUCAACGCAACAAGUCCAUUUUACUCCCUUCAACUAUAUCACCGGAUCAGCAUUGAAACCCCUCAACUAUAUUUGGGCUCACUAUUUUUUGUUUCUCUUUAUAAAAGUUGUAUGUUAAGUUUGUGGGAUGAUAAAUCGUAUUACACCAUAUGUCUCAACCUUUUUAUAUAUUUAAAAGAUCACUGUUUGCACAAGUUGCAAGCACCUAACACUGAUUAAACAUGGAGAUUUAAAACCGCAUGUCAAUUGUCAUGAAAAAACUGUAAACACAGGUCCUGUUGCCGUAUGUGGAGAAUAAAAAAGUGAAAUGGUAUUAGGGAGUAGAGUCCCUUUUACUAGUUUAAGGGGUGAACCAUAAAAACCUAGGCCCUUUGGCAAAAUAAUUUGAGGGAGUAAAAUGAACCCUUUUUCAAAAAAGAAGAAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
14.23%
ME_num:
MEP:
74.19%
HE_num:
HEP:
11.38%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
embryo
Tau :
0.73
Avg Expression:
7.25
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Azucena // root // control--/--Azucena // root // Al | 1.62992385192688 | 0.0448702022522749 |