Chr:
Chr2
Start:
32520301
End:
32520913
Strand:
.
Ref_name:
OSA-LNCN3343
Sequence
(OSA-LNCN3343.1):
CUUGCAUCAUUUUCUCACAUAAUUAAGUCAAAAGUCAGAGCACAAAGUCAUAAGCACACAGCAAAUUCCCAGCUCUCUCGAGUCGACACACUAAAAUAAACCAAAGCCUUGAUGCAUGACCAGCACCCCGAUUCCCUGUAAAUUAAUAUAAACCAGACAGAACAAUACUAAUCCAAGCAUGAUGCAGAGAGUAUCUUAUCACAGGACAUAACAUAGAAAGAUACUUUCCCAUUCAAAAGGAAAUGAAAAACCAAAUGAUUGACUUAACCCAAAGUAUAAGCAGCAACAGCAGGUCGGGUGGUAAUUAACAAUGGCUUGGCGCAUGGCAUUUUCCAAUGGCCAAGUAACCGGUGGGAAGCUCGGAGGAUACUUCAUCACAUCACUUGCUGGCUGGUUUCUUUCAGCAGCAGCUGAGCUGCCUACUGUAGCUGCAUCUUCUCAAUAUCCCAAAGCCGGCCGGCUCCAAAGCAGGAGUUGCCUCCCGCCAUCGCCAAGGGCCAACUGGACCAAGCCCUGGUCCAGAGGCAGGCAGGAGAGUAGUAGUAGUAGUAGCUAGUAGUAGCAGCGGUGGCUUGUUAGCUAGCUUCUGGAGUCCAGCCUUCCCCAGUUGGCG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
73.98%
ME_num:
MEP:
23.98%
HE_num:
HEP:
1.83%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flower
Tau :
0.84
Avg Expression:
3.00
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 10.5h | 2.48027972651039 | 0.00481872557104091 |
| 2 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 4.10674940455403 | 2.60825267590691e-11 |
| 3 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -5.55323757604323 | 0.000162355447680026 |