Chr:
Chr2
Start:
31758402
End:
31761647
Strand:
-
Ref_name:
OSA-LNCN3331
Sequence
(OSA-LNCN3331.1):
CUACAGAUAUUUUAUGUGGGAACCAUAGCUCCAAACAUGACAAGACAAACAAAAUACCACCCGCAGAGGAACUCGUAUUGUAUUUUCUACUAAUCAAACAAGCAAAUGGCUUCCAAGGUUCAUAGCCGGAAAAAAGGCUUAUGAAAGCAGAUUGGAACCCCAACAUAUAGUAGACCUUUGGUAGUUUGGCUGCUUCAGAAGGGAUGUGUGUGGUACAAACAUGGAACGAAUCAUGAUUAUAUCUCCAAAGCAAGCAAACAAAAUCUGGUAUAAAAUUGGCCUUCGCUUGUUUUGGCAUAAGCAAUAUAUUAAUGAAUAGACGUCAGAGCAAGGUGCUAAACACUGUAACAAUCUAUCGAUUCAGUUACGCCCGUAAUCUCAGGGGCUCAGAACCACCACUGGAAUAGGUAUGAACCCUAGAAAGCUUCCUAAUCUCAGGACCCCAAAUAUUCGCACUUUAAACACUAACCAAUCAAUCAUUUAGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
1.02%
ME_num:
MEP:
11.79%
HE_num:
HEP:
86.99%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
callus
Tau :
0.70
Avg Expression:
38.58
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 7h | -1.75275201613979 | 0.0421843982572885 |
2 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -1.03414628534347 | 0.0274579305685404 |