Chr:
Chr2
Start:
30662605
End:
30663655
Strand:
-
Ref_name:
OSA-LNCN3312
Sequence
(OSA-LNCN3312.1):
GUUUAACUUAGAAAAAAGUCAAACAACUUACAAUAUGAAACGGAAGGAGUACUGGAGAUUCCUUCGCCCAUAUAAAAACAAUGUAUACACACUAAUCUUGUGUAAUAGUACUACAUCUAUAACUAAAGGAAAAAGUACGAAUUACCCCUCCCCCGAACUAUCGCGGUCGGCCGAAUUACCCCCUGAACCAUAAAACCGGACAUUCUUGACUCCAAACUAUACAAACCGGACAAAUUACCCCCCUCGACCUAAUCCGCGGUGGUUUUGGUUUACGUGACGUACGCGUGGCAGUCCAGUUAGCAUUCUAUUUAUAAAAAGAUGUGGGACCCACCUGCCAUACUCUUUCUCUCUCUUCUCUCUCUCACUCUUUCUCUCUCUCUCACGGACGGCGCUCGAUGUGAUACUGCGCAUCCGCAUCCCGCGCGCAGCCGCCGCCGCCUCCGCGUCCCCGCCUCUGAGUCCCGCGCGCAGUCGUUGCCGCCUCCACGUCCCGCGCGUAGCCGCCGUCGCCGCUGCGUCCUGCGCGCAGCCGUCGCCGCCGCCGCCUCCGAGUCCCGCGCGCAGCCGCCGCCGCCUCCGAGUCCCGUGCGCAGCCGGCACCGCCUCCCAGUCCCGCGCGCAGCCACCUCCGCCUCCGCAUCCCGCGCCGCCGCGGCCUCCGCAUCCCGCCCGCCGCCGCCUUCGCAUCCCAGGUGCCGUGCUCACCGAGAGAGAGGGAGAGAGAGAGAGAGGGGAAGAGGAGAGAGACUCACCGAGAGGGAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
67.89%
ME_num:
MEP:
31.91%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.81
Avg Expression:
1.27
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | -4.20446559586627 | 7.62485506539842e-07 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | -4.04514497630088 | 1.96059007297741e-07 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -4.44984588333974 | 8.95980137442466e-08 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -6.64981314598519 | 1.88167406567221e-06 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | -6.89329278581686 | 3.18317054576713e-07 |
| 6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | -7.05995841703264 | 1.5760214365182e-07 |
| 7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hN | -1.6751649363673 | 0.00492491035196513 |
| 8 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | -5.8830173889011 | 4.49803625786071e-07 |
| 9 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hA | -2.25984045530495 | 0.000164638516478397 |
| 10 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -5.11946867075565 | 2.46462679050832e-07 |
| 11 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -4.25665611807858 | 5.74298339880986e-09 |
| 12 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -1.16063312991307 | 0.000493272814220245 |
| 13 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA | -3.69681809433181 | 1.60260292619838e-06 |
| 14 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -5.62045893598695 | 5.8182151833191e-09 |