Chr:
Chr2
Start:
25605011
End:
25605739
Strand:
-
Ref_name:
OSA-LNCN3199
Sequence
(OSA-LNCN3199.1):
GAGCCUUCAAAUGCUCGCAGUGCUAGCUCGAUCCUACGUACGUAAACCGGUAAAUAAUCUGAGAAGAAUGAAGAAGAAUCAGCAGCUCGCGUGCACGCUCCUACGUCGUCUUCACUGUGGUGGAUGGACGGCGUCCUGGUAGUUUCCGUCGGAUGCACGAAGCAUCUACUACUCCUCUCUCCACCUCUCCUUUUUUCUGUAACUUUUGAUACAGCUGCGUCUUUUUUGUUGUUAGCUGUUUCUGCACAGUGACGAUACUCCAAACGGUCAGUGGAAUUUCACUUUCAGUUAUUUGGAAUUAGAUCCUCCAAAUUAUUUCUCCUUGCCCUUCAGAAUUAACUAAACGUCAGCACUAUAGUGCCCGCAUAUUAUUGGUUAAUUUCACUGGAUCUAGAAUAGUGAAUAUCAAUUCCAUUUUUCAUUUUGUCUCAUCGCCAGGCUUCAAUGUUUAGUCAUGAGGGUGUGUUUUUCAUUGGGUAAAACUAGAAGCCAGGAGAGUUUGAGCAGGUCUUGAAGAGGAGGACUUGUGAUCAAGCCCAUUCUUCAGAGGCCUUUUUGGGCCCAGUGAGUAAAAUGUUUCCAAAUGAAUGCCCGCCCAACACUUCUACCUACGUAGUAUAGUCCAGCAUUUUGCAAUUUUGGGAAUGUUCAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
97.97%
ME_num:
MEP:
1.83%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.96
Avg Expression:
0.41
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 3.81187261266346 | 0.0459226895781721 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | 5.73159878704792 | 0.000128167774123669 |