Chr:
Chr2
Start:
25154834
End:
25155867
Strand:
.
Ref_name:
OSA-LNCN3190
Sequence
(OSA-LNCN3190.1):
AGGCAAAAUAUGUUGGAGUAUACGAUGCGCUGCAUAUCCGAACAAGACCAUUUGAUUCUGGCAGAGACAAGGGCGGUGCUAGUUACAGUAUGCUAGGUGCGCCUGUAGGUUAGACGAGCAGGACGAGACAGUAUGGUUGUUUUUUUACUCUUAAGACCAGCAGGGAGUACCACUGAACCAGCAUUCUUCUGGGACGCGAUAAACGAAGUUUAUCCAUCUAAUUAGCGAGGAUAAGGUGAUCGCAUUAUACAAUUAAGGCUGGCAAUGUCCCCAGGAAGGACACGUACGCGAGCGGCCGCAGCUGCGCAUCCGCCUCACCGUCGCUUUCGGCGCGGGGAGCAACAUAUGCACCGUCGUAGUAGACCCAGUCGGCACGCGGGUGUCGGCGUACGUACGUGUCGCCGCCGGAGUGGCUCGGCGGGAGCGGCCACGUGGGCUCGCCCUGCUCGCGCCUGUAUCCGCGGCGGGGCGCAGGCGGAUUAGCUCGAUCGGACAGAUCUUGUAGCGGUCCGACGAAGCAGCGAGCUGGCCAUCCCGUUUGGCGGCGAUGGGGCGAUCCAUGUAUGGAUGCAUCGGUGGUGGCUGGCAAUAGUGGCAUUGCCGCAGCGGCAGCCAGACGAGAUCGAGGAGGAGAUGAGCUGCGGCCUGUGGCCCUGUAUCUAUAUAUCUGCUCGUGCCGUUUUGCGCUGGACAUGAUACGUGCCGACAUGCGAGCGUGCGGGCGUGGCGGUGGCCUCAAUUCCUCGAAAUUUCCCUUGGGACCCCACGUGCGCCGGAGCCGUCGGAACGUUGUGGUUGCGGCAGCAGCACGUGAUGCUGAUGAGCCAGUUGGUCGUCUGAUGUGAAUUACUGACGCAGUGACGCUGUCGCGAACUCGCGGUAGGAUGCAGGGCUGCGUCGAGGCGAAGUCUCGAGCAAGCAGAGCAGAGAGAACGGGAAACUUCUUCAGCGGCUCAACGCGCAAAAGAAGCAACAGCUUGAACGCGCGAGAGUUGUCGAAGUAGUAGUACAAACAGGCUAUGGGCCAGAGGCUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
89.02%
ME_num:
MEP:
6.71%
HE_num:
HEP:
4.07%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.95
Avg Expression:
2.76
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 8.42173388438922 | 7.30518819627327e-11 |
| 2 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 1h50 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 1h50 min" | 7.16641413563036 | 0.000159868579484962 |
| 3 | Nipponbare // shoot // "Control, 22C for 10 min, then 30C for 50 min"--/--Nipponbare // shoot // "Heat, 42C for 10 min, then 30C for 50 min" | 9.1276702728899 | 2.36129676062891e-08 |
| 4 | 9311 // leaf // control--/--9311 // leaf // salt | 4.02997727712899 | 3.24257217376921e-09 |
| 5 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 6.38614191849339 | 6.75455487281612e-06 |
| 6 | 9L136 // leaf // control--/--9L136 // leaf // salt | 3.44859967793051 | 4.85725533013488e-09 |