RiceNCexp
Rice Non-coding RNA Co-Expression Atlas

OSA-LNCN3179

Function Link

Tissue-specific Expression analysis
Differential Expression analysis
Co-Expression Curve
Network analysis

Basic Info

Chr:

Chr2

Start:

24823120

End:

24827583

Strand:

+

Ref_name:

OSA-LNCN3179

Sequence
(OSA-LNCN3179.1):

CGCGCCGUGUCAUAUCUGGCGAUGUGCGUGUGCCAAUAGGCCGGCAUGCUCCCAUGGCUUGUCUUGGUGAUGUACUAGUCCACUUUUUCCAUGCACACAUGUGGAUGUGGGGGAAGUUUCAGUAUCUCACACGCGCACAAACUAUAGUCACAGAAUAAUAACAAUAUAUAGGAAAUAUAAAAUACAAAUAUACUGAAAGUACGUACACGCUAAUGCUAAUGAAGAAGACGUACGACACAUCACGCAGGCAUGCAUAUGCAUAAUGCUGGGAUUGGUCUAGCUGAACUAGCUAGUUCUGGCGUACGUUAGGGCCGGGCUACCGAUCGAUGGACUGGAUCCAAUGCUGACAAGGCCGUCGAGAUGCUGUGAUCGAUUCUGGUCGAUCUCUGCAUGCUCGAUCGACGGCGGCGGUGGUCCGUCUCAGUGCGGUCGUUGUCGAUCAGCUGCACACUGGGACUGACGAUGUCUUUGAAGGAUGACAGAACAACAAGUAGGUGCGAUAUAUGAAGCACCACGACUAGUACUGCUUCCCCUUCUGCAGUUCACCAGCUGUAGGCUGUAGCGCAGGUCUGAACCAUUUUAUCUUCCAAGCAUGUAUGAGAGUAAGACAUGCAAGAGAGAUCACAAGAGUUAAGGGACAAUAUUACGGAUAAGUGGUGGAUUCAGAAAAUCGAUACACCAGUGCCAUAACAUAUUUACCCGUGUCAUAAUGUGCUAUGUAUGUCUAAACCAUAUUAUUAGAAAAGUUUUAUGGUACUUUCAAAAAAAAAAUCUCAAAGUACCUAAAAUUUACCCAUACCUUAGAGAUACCUAUUACAAAGAUACUAAAUUUUACAUUAGAAAAUAUAAUAAUCCCUUAUACUUUUUAAAAAUGAUAAAAUUACCUUUAUCAUUACCUUUUAAGUAGGUAGAAGAAACCAUUUAAUAGGUUUUGCCAAAGAUGUUCGGGAUCGUCUGACCCUCAUCCAACUUAAUCAUUAUAGAUCAUGAUGGGUCCCAUGACAAUUGUAAUCAUUUUUUUAAUCAUCAACAGAAAAAUAUAAAGCCAAUUUCAAUAUUGAAAUGAAGGAGAAGCCAUAUUCAAAUAUUAAUGCAUCGGGAUAGCAUAUAAUAUAACUAUACGUGAAGGUACGUUCACAUACACGCAUAUAUGAGGAAUCAUAGAAGUGUGAUGGUCGAAUCAUAGUUAUGUGACUCUAAAUAUUAGGGUUCAAAUCUCGUUGUUGACCCACAAAUAUUACACACGCCGUUGAGUUUUUAAUAGAAAUUUAGUGAGACUAUUAACAUUGGCAUUUAUUUCUUUGAGUGUGUGUUAAGAUGCAGCUCAUCGUAGGUGUGUGCGUGUAGUGUAGGAGCAAAAAGUAUGUAUAUGUCUUUCAUGUAAUAAGAAAACGCAGGAAUGGAUGCAAUGAUGUAAGACUUCACAUACCACUAGGCCCUAGCUAAAUAUGAUUCCACAUUCAUACACACUUACAUAUGAGUAAAUUCUAGUAUAAAAAGUGUAUAUUGUUUUUUCUACUGAUAAGUGAGAAGAAGGACAAUUAUUCAUGGAAGACCUCAUGAUCGAUGAUGGUACAAUGACAUUAACCCAAACUACUACGAGCACACCACAUUAAGUCUUCGCAUUUGGGAAUAGAGAUAUGGGUGGAGGUGGAGGCUCGAAGGGAGGCCAUGAGGGCAGGAUCCUAGAAAAUGAGGGAGAUGGUGGUAAGACAAUGGAUAGCGCCACAUUAAGUCUCUGCAUUUGGGAAUAGAGAUAUUGGUGGAGGUGGAGGUGGAGGCUCGAAGGGAGGCCAUGGGGGCAUGAUUCCAGUAAAGGAGGGAGAUGGUGGUAAGACAAUGGAUAACGGUAGUGCACUAGUGGUUGUACCAAAGAGAGAGUGACGGUGGAUGCUUAAUGCUGUUCUAGUAGGCAUAGGAAGGAGGGGGAGGGGGGGGGGGUUGAGAGUAAGAGAGGAGUUGGUUUAAUUAAGCUUAUAGUUGGUGCACAUAUCUAAAAGCAAAUAUUUUUCUACCAUUACACCAAACACCAAAGUCACGCACUCGCACACCAACACACGUGUUACCUAAUACAUAUUCAGGGAGAUGGAGAUGAGGUGUCCCUAACUAUGCUAAAAAGGAUAAAGGCAAGCAACAAAUUUGUGUGUGUAAUAUUUAUGGACAUACUCUCUUCGUCACAAAAUAACUCAACCUAGCUACUACGGGAUGUGAUGUAUUCUAAUACUAUGAAUCUGGACAGAUUCGUAGUAUACUAGGAUAUGACACAUGACACAUCAUAUACUAUAUUCGUUUAUUUUGAGAUGGAGGGAGUUGAUCUCAAAGCAACCCUACCUUCUACUAAAAGUGGUUGAGACUAUUACUUAUUUAAAACCAAAUGAUUGACAAAUAGCCGGUCCCAAAAUAUGUGUGCAUCCACACCCAAUUAUGUCAAGAUAGAAUUCAUCCCUCUGUUCUCCACAUUUGUAUAUGCAUGUGCGGAAUGCCCUGCAUGUGUGAUCUGCAUCACUGCAUAUGCUUAGCCCCUUGCGAUCUAAACCAUCAAUUGAAAUUUACAUCAACAUCAAAUAAACAAAAUCGAACUAUAUUAUUUACACAUAGCUAGUAAGCUUGAUGGGCAUAUGGUACACACUGCUACCCUGACUGCUGAAGAUCGACUUAAUAAAUAUCUUUCAGAAUUCUGAAGAUUAUUAGGUUGAUCGAGUAGACAAUAACAAGAUUAAUUAAAUAUAACCAUAUUAUGCAAUAAGGUAUUAAUUUGUAGCUGUCGUAACGUUUACUGAAACAUAAAUUCACACAAAUAUACAUGAAUUCAAUUCACACAUCGCAAUGUGCGGCAAAAUUUUUCUGUUAUUAUGAGACUCAAGCUGUGUUACGGUUGUCCUGGCUGAAUCAUUUCAGAACAUGUGUGCUAGCUCAAGAUUUGAGCUCUAGCUGAGAUUAAUUGCUGGUUGUAAAGUGAUGUACAUUCAAUGUCUAGCUAUGAAAAGUCAAAUGAGACACAUAUAUUUCCUAGCUAGCCCCGGCAAUAUAUUUUUCCAAGCGGACGAACAAAACACACGCAUAAGAAUACAUAUUAAGGUAUAUCUUACCUUAGGUAAAUCACAGUUUUAGUAUGUAGUGUUUGGUUCAUACCACAAAUGUACUUUGCCUAACCAUUAGCCACCUAGCCCACAUGUCAUACACUCUAUUUUUUUUUUGCCUAUCUUUAUUUAAGCUUAGUUUGUCAUUUUGUUUGCCACAAAGGUGUUUGCCGCAAAAGACUAAGCUUAGUCACCUUACUAAAAAAUGUGUGGCAACAUUAGUUCUCAAUCAAACAGGCCCACAAAACAUCUGCAAGUUACUGACUAUUACAAAUAAGUACAACUAAUCAAGGAUAAUGGUCAACUGCUCUAUAAAAUAUUAAUGUGAAGCAAACAAACAAUUCCAUUGAUUUGGGGAAAGUACACAUGUAUUCCUAAUGCUUGGAAAGAAUAAGUAAUAAUUGGUCGUAAUUAAGUUGUAAUUAAUGCCCAUUAACUACUAUAUGUUGAUGAGAAAGCAUUUACUUUACUUUGUGUGUGCACGCAUGUACUACAUGGUUUUUUUUAAAAAAAAAAUCAGUAUCAAAAUUUUGAAAAUAUGUAGAUAAUAAGAAUAUAUAAAAUCUUUUUAUAGAAUGAAUCUUCACAGUAUUAGUAUAGCUCUUGUUGGGCCUUACAGAUAUAUCACAAUAAUAGACAUUAGUGUUCAAAGUUAUAUUUCGAAGAUCACUAGGUGUCCAUAUGAGAAGUACUCCCUCCAUUCUAGAAUAUUAAGUGUUCAAAAUCUAUACCAAAUAUAAAUAUUUCUAUAGUACAAUUUCCCUACCAACCAUACAUCAUAAGUAUUUAAUUCUCACCAAAUAUUACCCCAACCGCCCUUUCACUGUAUGUUCAGCCAUCUAUAAUUUAAUGCGGUAUAUCAUAGUCUUUUUCCUCCACCGUAGUAUAUUUUAGGAUGGAUGGAGUACUUUUUACUAGAGCAAAAAUAAUAGUUCAUUUCCUAGUGAACUAUUUAGAUGCAUUUAUGGUUAAUCUUCACUGGAACUCUUCAUUUCACAUUAAGGCAUCUUAUUUCUCGCUCCUUACCUCUAAACUUAAACAAUUUAAUCUUUUUUUGGCCUCCCUCAACUUUUUUUAAAGAAAAGGAUAAAGGUUUUCCCCUCCUCUACUAUAAAAAUGACAAAAAAAAAGUAGGUAGUCAUGGAUUUAUCUCUCAUUUUGAGGGUUGGUGGAUUCAAUUCUGGUUUAUAUAUAGUUUUUUUCUCCUCACUUUAUUAAUUGAUGAUUGUCUUCUUAUAUAAAAAAAACUUGGUGUUACGUUUAUCACCCGUUAUCUAUGCCCUUAAAUUAUAAUUCAAUUGCACAUAUUACAUAUAUCAACUCCAUACAUUUCAAAAUAUAGGGCACAUUUUGUUUUUGUUAGAACAAGACUUUGACUAACAAU

Sequence
(OSA-LNCN3179.2):

CCAUAUUCAAAUAUUAAUGCAUCGGGAUAGCAUAUAAUAUAACUAUACGUGAAGGUACGUUCACAUACACGCAUAUAUGAGGAAUCAUAGAAGUGUGAUGGUCGAAUCAUAGUUAUGUGACUCUAAAUAUUAGGGUUCAAAUCUCGUUGUUGACCCACAAAUAUUACACACGCCGUUGAGUUUUUAAUAGAAAUUUAGUGAGACUAUUAACAUUGGCAUUUAUUUCUUUGAGUGUGUGUUAAGAUGCAGCUCAUCGUAGGUGUGUGCGUGUAGUGUAGGAGCAAAAAGUAUGUAUAUGUCUUUCAUGUAAUAAGAAAACGCAGGAAUGGAUGCAAUGAUGUAAGACUUCACAUACCACUAGGCCCUAGCUAAAUAUGAUUCCACAUUCAUACACACUUACAUAUGAGUAAAUUCUAGUAUAAAAAGUGUAUAUUGUUUUUUCUACUGAUAAGUGAGAAGAAGGACAAUUAUUCAUGGAAGACCUCAUGAUCGAUGAUGGUACAAUGACAUUAACCCAAACUACUACGAGCACACCACAUUAAGUCUUCGCAUUUGGGAAUAGAGAUAUGGGUGGAGGUGGAGGUGGAGGCUCGAAGGGAGGCCAUGGGGGCAUGAUUCCAGUAAAGGAGGGAGAUGGUGGUAAGACAAUGGAUAACGGUAGUGCACUAGUGGUUGUACCAAAGAGAGAGUGACGGUGGAUGCUUAAUGCUGUUCUAGUAGGCAUAGGAAGGAGGGGGAGGGGGGGGGGGUUGAGAGUAAGAGAGGAGUUGGUUUAAUUAAGCUUAUAGUUGGUGCACAUAUCUAAAAGCAAAUAUUUUUCUACCAUUACACCAAACACCAAAGUCACGCACUCGCACACCAACACACGUGUUACCUAAUACAUAUUCAGGGAGAUGGAGAUGAGGUGUCCCUAACUAUGCUAAAAAGGAUAAAGGCAAGCAACAAAUUUGUGUGUGUAAUAUUUAUGGACAUACUCUCUUCGUCACAAAAUAACUCAACCUAGCUACUACGGGAUGUGAUGUAUUCUAAUACUAUGAAUCUGGACAGAUUCGUAGUAUACUAGGAUAUGACACAUGACACAUCAUAUACUAUAUUCGUUUAUUUUGAGAUGGAGGGAGUUGAUCUCAAAGCAACCCUACCUUCUACUAAAAGUGGUUGAGACUAUUACUUAUUUAAAACCAAAUGAUUGACAAAUAGCCGGUCCCAAAAUAUGUGUGCAUCCACACCCAAUUAUGUCAAGAUAGAAUUCAUCCCUCUGUUCUCCACAUUUGUAUAUGCAUGUGCGGAAUGCCCUGCAUGUGUGAUCUGCAUCACUGCAUAUGCUUAGCCCCUUGCGAUCUAAACCAUCAAUUGAAAUUUACAUCAACAUCAAAUAAACAAAAUCGAACUAUAUUAUUUACACAUAGCUAGUAAGCUUGAUGGGCAUAUGGUACACACUGCUACCCUGACUGCUGAAGAUCGACUUAAUAAAUAUCUUUCAGAAUUCUGAAGAUUAUUAGGUUGAUCGAGUAGACAAUAACAAGAUUAAUUAAAUAUAACCAUAUUAUGCAAUAAGGUAUUAAUUUGUAGCUGUCGUAACGUUUACUGAAACAUAAAUUCACACAAAUAUACAUGAAUUCAAUUCACACAUCGCAAUGUGCGGCAAAAUUUUUCUGUUAUUAUGAGACUCAAGCUGUGUUACGGUUGUCCUGGCUGAAUCAUUUCAGAACAUGUGUGCUAGCUCAAGAUUUGAGCUCUAGCUGAGAUUAAUUGCUGGUUGUAAAGUGAUGUACAUUCAAUGUCUAGCUAUGAAAAGUCAAAUGAGACACAUAUAUUUCCUAGCUAGCCCCGGCAAUAUAUUUUUCCAAGCGGACGAACAAAACACACGCAUAAGAAUACAUAUUAAGGUAUAUCUUACCUUAGGUAAAUCACAGUUUUAGUAUGUAGUGUUUGGUUCAUACCACAAAUGUACUUUGCCUAACCAUUAGCCACCUAGCCCACAUGUCAUACACUCUAUUUUUUUUUUGCCUAUCUUUAUUUAAGCUUAGUUUGUCAUUUUGUUUGCCACAAAGGUGUUUGCCGCAAAAGACUAAGCUUAGUCACCUUACUAAAAAAUGUGUGGCAACAUUAGUUCUCAAUCAAACAGGCCCACAAAACAUCUGCAAGUUACUGACUAUUACAAAUAAGUACAACUAAUCAAGGAUAAUGGUCAACUGCUCUAUAAAAUAUUAAUGUGAAGCAAACAAACAAUUCCAUUGAUUUGGGGAAAGUACACAUGUAUUCCUAAUGCUUGGAAAGAAUAAGUAAUAAUUGGUCGUAAUUAAGUUGUAAUUAAUGCCCAUUAACUACUAUAUGUUGAUGAGAAAGCAUUUACUUUACUUUGUGUGUGCACGCAUGUACUACAUGGUUUUUUUUAAAAAAAAAAUCAGUAUCAAAAUUUUGAAAAUAUGUAGAUAAUAAGAAUAUAUAAAAUCUUUUUAUAGAAUGAAUCUUCACAGUAUUAGUAUAGCUCUUGUUGGGCCUUACAGAUAUAUCACAAUAAUAGACAUUAGUGUUCAAAGUUAUAUUUCGAAGAUCACUAGGUGUCCAUAUGAGAAGUACUCCCUCCAUUCUAGAAUAUUAAGUGUUCAAAAUCUAUACCAAAUAUAAAUAUUUCUAUAGUACAAUUUCCCUACCAACCAUACAUCAUAAGUAUUUAAUUCUCACCAAAUAUUACCCCAACCGCCCUUUCACUGUAUGUUCAGCCAUCUAUAAUUUAAUGCGGUAUAUCAUAGUCUUUUUCCUCCACCGUAGUAUAUUUUAGGAUGGAUGGAGUACUUUUUACUAGAGCAAAAAUAAUAGUUCAUUUCCUAGUGAACUAUUUAGAUGCAUUUAUGGUUAAUCUUCACUGGAACUCUUCAUUUCACAUUAAGGCAUCUUAUUUCUCGCUCCUUACCUCUAAACUUAAACAAUUUAAUCUUUUUUUGGCCUCCCUCAACUUUUUUUAAAGAAAAGGAUAAAGGUUUUCCCCUCCUCUACUAUAAAAAUGACAAAAAAAAAGUAGGUAGUCAUGGAUUUAUCUCUCAUUUUGAGGGUUGGUGGAUUCAAUUCUGGUUUAUAUAUAGUUUUUUUCUCCUCACUUUAUUAAUUGAUGAUUGUCUUCUUAUAUAAAAAAAACUUGGUGUUACGUUUAUCACCCGUUAUCUAUGCCCUUAAAUUAUAAUUCAAUUGCACAUAUUACAUAUAUCAACUCCAUACAUUUCAAAAUAUAGGGCACAUUUUGUUUUUGUUAGAACAAGACUUUGACUAACAAU

Sequence
(OSA-LNCN3179.3):

GAUGCAAUGAUGUAAGACUUCACAUACCACUAGGCCCUAGCUAAAUAUGAUUCCACAUUCAUACACACUUACAUAUGAGUAAAUUCUAGUAUAAAAAGUGUAUAUUGUUUUUUCUACUGAUAAGUGAGAAGAAGGACAAUUAUUCAUGGAAGACCUCAUGAUCGAUGAUGGUACAAUGACAUUAACCCAAACUACUACGAGCACACCACAUUAAGUCUUCGCAUUUGGGAAUAGAGAUAUGGGUGGAGGUGGAGGCUCGAAGGGAGGCCAUGGGGGCAUGAUUCCAGUAAAGGAGGGAGAUGGUGGUAAGACAAUGGAUAACGGUAGUGCACUAGUGGUUGUACCAAAGAGAGAGUGACGGUGGAUGCUUAAUGCUGUUCUAGUAGGCAUAGGAAGGAGGGGGAGGGGGGGGGGGUUGAGAGUAAGAGAGGAGUUGGUUUAAUUAAGCUUAUAGUUGGUGCACAUAUCUAAAAGCAAAUAUUUUUCUACCAUUACACCAAACACCAAAGUCACGCACUCGCACACCAACACACGUGUUACCUAAUACAUAUUCAGGGAGAUGGAGAUGAGGUGUCCCUAACUAUGCUAAAAAGGAUAAAGGCAAGCAACAAAUUUGUGUGUGUAAUAUUUAUGGACAUACUCUCUUCGUCACAAAAUAACUCAACCUAGCUACUACGGGAUGUGAUGUAUUCUAAUACUAUGAAUCUGGACAGAUUCGUAGUAUACUAGGAUAUGACACAUGACACAUCAUAUACUAUAUUCGUUUAUUUUGAGAUGGAGGGAGUUGAUCUCAAAGCAACCCUACCUUCUACUAAAAGUGGUUGAGACUAUUACUUAUUUAAAACCAAAUGAUUGACAAAUAGCCGGUCCCAAAAUAUGUGUGCAUCCACACCCAAUUAUGUCAAGAUAGAAUUCAUCCCUCUGUUCUCCACAUUUGUAUAUGCAUGUGCGGAAUGCCCUGCAUGUGUGAUCUGCAUCACUGCAUAUGCUUAGCCCCUUGCGAUCUAAACCAUCAAUUGAAAUUUACAUCAACAUCAAAUAAACAAAAUCGAACUAUAUUAUUUACACAUAGCUAGUAAGCUUGAUGGGCAUAUGGUACACACUGCUACCCUGACUGCUGAAGAUCGACUUAAUAAAUAUCUUUCAGAAUUCUGAAGAUUAUUAGGUUGAUCGAGUAGACAAUAACAAGAUUAAUUAAAUAUAACCAUAUUAUGCAAUAAGGUAUUAAUUUGUAGCUGUCGUAACGUUUACUGAAACAUAAAUUCACACAAAUAUACAUGAAUUCAAUUCACACAUCGCAAUGUGCGGCAAAAUUUUUCUGUUAUUAUGAGACUCAAGCUGUGUUACGGUUGUCCUGGCUGAAUCAUUUCAGAACAUGUGUGCUAGCUCAAGAUUUGAGCUCUAGCUGAGAUUAAUUGCUGGUUGUAAAGUGAUGUACAUUCAAUGUCUAGCUAUGAAAAGUCAAAUGAGACACAUAUAUUUCCUAGCUAGCCCCGGCAAUAUAUUUUUCCAAGCGGACGAACAAAACACACGCAUAAGAAUACAUAUUAAGGUAUAUCUUACCUUAGGUAAAUCACAGUUUUAGUAUGUAGUGUUUGGUUCAUACCACAAAUGUACUUUGCCUAACCAUUAGCCACCUAGCCCACAUGUCAUACACUCUAUUUUUUUUUUGCCUAUCUUUAUUUAAGCUUAGUUUGUCAUUUUGUUUGCCACAAAGGUGUUUGCCGCAAAAGACUAAGCUUAGUCACCUUACUAAAAAAUGUGUGGCAACAUUAGUUCUCAAUCAAACAGGCCCACAAAACAUCUGCAAGUUACUGACUAUUACAAAUAAGUACAACUAAUCAAGGAUAAUGGUCAACUGCUCUAUAAAAUAUUAAUGUGAAGCAAACAAACAAUUCCAUUGAUUUGGGGAAAGUACACAUGUAUUCCUAAUGCUUGGAAAGAAUAAGUAAUAAUUGGUCGUAAUUAAGUUGUAAUUAAUGCCCAUUAACUACUAUAUGUUGAUGAGAAAGCAUUUACUUUACUUUGUGUGUGCACGCAUGUACUACAUGGUUUUUUUUAAAAAAAAAAUCAGUAUCAAAAUUUUGAAAAUAUGUAGAUAAUAAGAAUAUAUAAAAUCUUUUUAUAGAAUGAAUCUUCACAGUAUUAGUAUAGCUCUUGUUGGGCCUUACAGAUAUAUCACAAUAAUAGACAUUAGUGUUCAAAGUUAUAUUUCGAAGAUCACUAGGUGUCCAUAUGAGAAGUACUCCCUCCAUUCUAGAAUAUUAAGUGUUCAAAAUCUAUACCAAAUAUAAAUAUUUCUAUAGUACAAUUUCCCUACCAACCAUACAUCAUAAGUAUUUAAUUCUCACCAAAUAUUACCCCAACCGCCCUUUCACUGUAUGUUCAGCCAUCUAUAAUUUAAUGCGGUAUAUCAUAGUCUUUUUCCUCCACCGUAGUAUAUUUUAGGAUGGAUGGAGUACUUUUUACUAGAGCAAAAAUAAUAGUUCAUUUCCUAGUGAACUAUUUAGAUGCAUUUAUGGUUAAUCUUCACUGGAACUCUUCAUUUCACAUUAAGGCAUCUUAUUUCUCGCUCCUUACCUCUAAACUUAAACAAUUUAAUCUUUUUUUGGCCUCCCUCAACUUUUUUUAAAGAAAAGGAUAAAGGUUUUCCCCUCCUCUACUAUAAAAAUGACAAAAAAAAAGUAGGUAGUCAUGGAUUUAUCUCUCAUUUUGAGGGUUGGUGGAUUCAAUUCUGGUUUAUAUAUAGUUUUUUUCUCCUCACUUUAUUAAUUGAUGAUUGUCUUCUUAUAUAAAAAAAACUUGGUGUUACGUUUAUCACCCGUUAUCUAUGCCCUUAAAUUAUAAUUCAAUUGCACAUAUUACAUAUAUCAACUCCAUACAUUUCAAAAUAUAGGGCACAUUUUGUUUUUGUUAGAACAAGACUUUGACUAACAAU

Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

386

LEP:

78.46%

ME_num:

105

MEP:

21.34%

HE_num:

0

HEP:

0.0%


Warning: Undefined variable $ncRNA_type in /home/www/html/RiceNCexp/browse_detail_info.php on line 222

Type:

MCR ()

Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

crown

Tau :

0.87

Avg Expression:

1.84

Tip: OSA-LNCN3179 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
1Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN2.918317869361882.2528943633943e-09
2Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN1.984796089218380.000343377701596133
3Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1.251671627295270.048846841388875
4Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA2.671532311462832.35463485143533e-05
5Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN1.690791488241840.00975735654531288
6Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA1.429837944998310.0162726232437561
7Nipponbare // root // "mock,14_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),14_days"2.132504497510310.0136209852701585
8Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA2.684998316225333.40269102092902e-08
9Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN3.146419309059144.23912646292244e-13
10Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA2.166073393357327.94907695457802e-06