Chr:
Chr2
Start:
20599543
End:
20599805
Strand:
.
Ref_name:
OSA-LNCN3095
Sequence
(OSA-LNCN3095.1):
CUCCCAUGUGAUAAGCUCGGCUGACCAUCUGCGAAACCCCAGUUUGACCGUCCUAGCUAGCAGCUUACUAGGCGGCUGCCACACACAUUCCACGCACGCGCCGAACACAGCUGCUGCUGCAGCAUGCAGGCGCUGAAUGUUUUUACUCCUACUACUCAUCAUCCGCGUGAUGGCCCACGGCAUGCAGCCGCUCUCAUCUCUCCACGAUAUAUCCACAUGCUGCUGCUCCUGCCGGAUAAACAACGGCUCUCGAUCGGUCAGAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
96.54%
ME_num:
MEP:
1.63%
HE_num:
HEP:
1.63%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
1.00
Avg Expression:
2.47
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // root // "mock,7_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),7_days" | 5.02832628200428 | 0.0372690329607563 |