Chr:
Chr2
Start:
16084024
End:
16086076
Strand:
-
Ref_name:
OSA-LNCN2987
Sequence
(OSA-LNCN2987.1):
AUAUAAUAAUAGUAAUACUAGUAGUAGUAUAACAACAGUAGUGUAGUAGUAAUAGUAGUAUAGUAGUACUACUGAUCACGCGUCUGUUGGGGGGGGGGGGGCAGCGCGCACUCCCGGCCCAUACGGCCCACGCAGCGCACGCAUGAUUUUUCCUUCUCUAAUCACCAUUGUUUUCUUUUUUUUUUCUGCUUUUUUUUCUUCCGUGAUUUUUUUUCGCUUUCCAUUUUUUUUUUGCUUUUUUUCCUGAUUACUUUUUAAUCUUCCAGCAGCAAGUGUUUUCAAUUUUUUUUGAAAGUUUUUAAAUUUUGACUUGAAAAUUUUUAAAUCUUAAUUUAAAAAAAUUCAAAUCUCGAGUUGAAAGUUUUUAAAUCCGAGUCGAAAGUUUUCAAAUCCGAGUUGAAAGUUUUCAAAUCUCGAGCUGAAAGUUUUCAAAUCCGAGGUGAAAGUUUUCAAAUCUCGAGCUGAAAGUUUUCAAAUCCGAGUUGAAAGUUUUCAAAUCUCGAACUGAAUGUUUUCAAAUCUCAAGUUGAAAGUUUUCAAAUUUGAGUUGAAAGUUUUCAAAUCUCGAGUUGAAAGUUUUCAAAAAUUUUCUUGCAAAUUGAAAAUUUUCAAAGUUUGAGUUGAAAGUUUUCAAAAUUUGAGUUCAAAAUUUAAAUCUUAAGUCAAAAGUUUUCAAAUGUAACUUCAAUUUUUUUCAAUCUAUCAGUAAAAAAAAUCUCCUAAUAAAAUAAAAAAUCUAUUGUUAAUUUCCGUCAUUAUCCUUAACUACCGUAUUCUUCCGAGAACGUGCGCCGCGUGCACGCUAGUUCUGCUCGCGGCGCGUACGCGCGUACUAGGAAGGCCUGAUGAUCUGACCCUUCCAACAGAUCAGAUAGCUCACAUCCUCCCCGUCCCCGCUUCUUACCGCUGCGUUAAUGGGCCACGCAUCCUUGCCCUUUUGCCACCGCAUUGGGCCGCCUCCGCCGGGCGCAUGCCUUUGGGACACGGAAACUAAGGGCAAUAGCAGUGCAAGCUAUAGGGCCCAUACCCCUAGCCCAAAGUCAUAGUUCAAAGACACUCACCCCAUAGUGGAAGCACCUAUAUAUGUGUAGCUUAAUUAGAUAGAGACGCAGGUGAAGGAAACGAAGCCCACAGUGGGCGAGACUCUAUGCGAGGACACGGGUAGCGCACCCAAAUUUAUUUUCCUCACCUACCCCUCACCCUCAGCGCAUCUCCUCCUUCGCCUCGCCUUCUCUUCCCUCGUCGUGCUCUCCUCCCUCGCGGCGGACGUCGGGGACACCGCCGCUGUGCGCCUCGCCUCGCCGUCGACCGCGCCGCCCGCACCGCUCGCUCCGCCCGCGCCGCCCGCUCCUCCUCCCGCUCGGACUCGGGAGCGGUGGGGGCGGCUGUAGUGGACGGCGCGGCGCCGACGGUGGGAGCGGCGGGAGUGGACGAGACGGCUCCGACGGGCGGCCGGCGGCGGGAGCGGACGGCUUCUACACCUCCGCGGCGCAGGAGGUCGUCGUGGCGGCAGCGGCGGCGGUGGAUCUGUCCGCCGUCCCUCCCCUCUCCCUCCCCCACUCCAUUGCUUCGACCGCUUCUGCCUCCGGCGAAGCGUCGAUCCAUCUAUCUCGCUGCCGCCGCCAUUUUUGUUUCUUGGGAGCUCGCCGGUGACGUGGUAUGUGUGUUGGUGGUGUGUGUUCAGAUUUGUUGAUUUGUGUUCGAUUUUUGUUUACUUGCCCUCGAUUUGUGUUCUUUGAUUUGUUGCAUUGUUCUGAUUUGGUUUUGAUUUUGAUUUGUGUUGAUGCAGCUGGAAGUGUGCUAGGCGCCUCCCAGCUCGUCGGGCACCCCGGUGGCAGCUGCGGCGCCGUCCGACGAGAUGGCGAGGCCGCCCUGGAUUUUGCUGUAGCGGGAGUGGAUUCGGAGGGCGUAUCGGGGAUUUCGCCCUUGGAUUUCACCGCGAGGGCACGUGUGGGCGAAGCCACGACGCCCACAGCAUGCACGCCUCCAGUCUUCUCCUCUGCUCACGGC
Sequence
(OSA-LNCN2987.2):
AUAUAAUAAUAGUAAUACUAGUAGUAGUAUAACAACAGUAGUGUAGUAGUAAUAGUAGUAUAGUAGUACUACUGAUCACGCGUCUGUUGGGGGGGGGGGGGCAGCGCGCACUCCCGGCCCAUACGGCCCACGCAGCGCACGCAUGAUUUUUCCUUCUCUAAUCACCAUUGUUUUCUUUUUUUUUUCUGCUUUUUUUUCUUCCGUGAUUUUUUUUCGCUUUCCAUUUUUUUUUUGCUUUUUUUCCUGAUUACUUUUUAAUCUUCCAGCAGCAAGUGUUUUCAAUUUUUUUUGAAAGUUUUUAAAUUUUGACUUGAAAAUUUUUAAAUCUUAAUUUAAAAAAAUUCAAAUCUCGAGUUGAAAGUUUUUAAAUCCGAGUCGAAAGUUUUCAAAUCCGAGUUGAAAGUUUUCAAAUCUCGAGCUGAAAGUUUUCAAAUCCGAGGUGAAAGUUUUCAAAUCUCGAGCUGAAAGUUUUCAAAUCCGAGUUGAAAGUUUUCAAAUCUCGAGUUGAAAGUUUUCAAAAAUUUUCUUGCAAAUUGAAAAUUUUCAAAGUUUGAGUUGAAAGUUUUCAAAAUUUGAGUUCAAAAUUUAAAUCUUAAGUCAAAAGUUUUCAAAUGUAACUUCAAUUUUUUUCAAUCUAUCAGUAAAAAAAAUCUCCUAAUAAAAUAAAAAAUCUAUUGUUAAUUUCCGUCAUUAUCCUUAACUACCGUAUUCUUCCGAGAACGUGCGCCGCGUGCACGCUAGUUCUGCUCGCGGCGCGUACGCGCGUACUAGGAAGGCCUGAUGAUCUGACCCUUCCAACAGAUCAGAUAGCUCACAUCCUCCCCGUCCCCGCUUCUUACCGCUGCGUUAAUGGGCCACGCAUCCUUGCCCUUUUGCCACCGCAUUGGGCCGCCUCCGCCGGGCGCAUGCCUUUGGGACACGGAAACUAAGGGCAAUAGCAGUGCAAGCUAUAGGGCCCAUACCCCUAGCCCAAAGUCAUAGUUCAAAGACACUCACCCCAUAGUGGAAGCACCUAUAUAUGUGUAGCUUAAUUAGAUAGAGACGCAGGUGAAGGAAACGAAGCCCACAGUGGGCGAGACUCUAUGCGAGGACACGGGUAGCGCACCCAAAUUUAUUUUCCUCACCUACCCCUCACCCUCAGCGCAUCUCCUCCUUCGCCUCGCCUUCUCUUCCCUCGUCGUGCUCUCCUCCCUCGCGGCGGACGUCGGGGACACCGCCGCUGUGCGCCUCGCCUCGCCGUCGACCGCGC
Sequence
(OSA-LNCN2987.3):
AUAUAAUAAUAGUAAUACUAGUAGUAGUAUAACAACAGUAGUGUAGUAGUAAUAGUAGUAUAGUAGUACUACUGAUCACGCGUCUGUUGGGGGGGGGGGGGCAGCGCGCACUCCCGGCCCAUACGGCCCACGCAGCGCACGCAUGAUUUUUCCUUCUCUAAUCACCAUUGUUUUCUUUUUUUUUUCUGCUUUUUUUUCUUCCGUGAUUUUUUUUCGCUUUCCAUUUUUUUUUUGCUUUUUUUCCUGAUUACUUUUUAAUCUUCCAGCAGCAAGUGUUUUCAAUUUUUUUUGAAAGUUUUUAAAUUUUGACUUGAAAAUUUUUAAAUCUUAAUUUAAAAAAAUUCAAAUCUCGAGUUGAAAGUUUUUAAAUCCGAGUCGAAAGUUUUCAAAUCCGAGUUGAAAGUUUUCAAAUCUCGAGCUGAAAGUUUUCAAAUCCGAGGUGAAAGUUUUCAAAUCUCGAGCUGAAAGUUUUCAAAUCCGAGUUGAAAGUUUUCAAAUCUCGAACUGAAUGUUUUCAAAUCUCAAGUUGAAAGUUUUCAAAUUUGAGUUGAAAGUUUUCAAAUCUCGAGUUGAAAGUUUUCAAAAAUUUUCUUGCAAAUUGAAAAUUUUCAAAGUUUGAGUUGAAAGUUUUCAAAAUUUGAGUUCAAAAUUUAAAUCUUAAGUCAAAAGUUUUCAAAUGUAACUUCAAUUUUUUUCAAUCUAUCAGUAAAAAAAAUCUCCUAAUAAAAUAAAAAAUCUAUUGUUAAUUUCCGUCAUUAUCCUUAACUACCGUAUUCUUCCGAGAACGUGCGCCGCGUGCACGCUAGUUCUGCUCGCGGCGCGUACGCGCGUACUAGGAAGGCCUGAUGAUCUGACCCUUCCAACAGAUCAGAUAGCUCACAUCCUCCCCGUCCCCGCUUCUUACCGCUGCGUUAAUGGGCCACGCAUCCUUGCCCUUUUGCCACCGCAUUGGGCCGCCUCCGCCGGGCGCAUGCCUUUGGGACACGGAAACUAAGGGCAAUAGCAGUGCAAGCUAUAGGGCCCAUACCCCUAGCCCAAAGUCAUAGUUCAAAGACACUCACCCCAUAGUGGAAGCACCUAUAUAUGUGUAGCUUAAUUAGAUAGAGACGCAGGUGAAGGAAACGAAGCCCACAGUGGGCGAGACUCUAUGCGAGGACACGGGUAGCGCACCCAAAUUUAUUUUCCUCACCUACCCCUCACCCUCAGCGCAUCUCCUCCUUCGCCUCGCCUUCUCUUCCCUCGUCGUGCUCUCCUCCCUCGCGGCGGACGUCGGGGACACCGCCGCUGUGCGCCUCGCCUCGCCGUCGACC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
75.2%
ME_num:
MEP:
21.34%
HE_num:
HEP:
3.25%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flag_leaf
Tau :
0.92
Avg Expression:
3.49
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 1.00243272020235 | 0.0220018946662231 |
2 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -1.28376481836997 | 0.00101355068392469 |
3 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -1.14238537489224 | 0.0276956642975956 |
4 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -1.28005811922783 | 3.56423506567726e-05 |