Chr:
Chr2
Start:
15433730
End:
15434850
Strand:
+
Ref_name:
OSA-LNCN2970
Sequence
(OSA-LNCN2970.1):
AAUGAUACUAAUAUUGCGAUGCCUUUAACUAAAUCUGAGUUAUUAUGAAACAAAUGUAUUUUUGUGCCUAUUGCUUUGGAUACUAAUAUUUUGCAGGCAUAUGAGAACAACCAAGGUAAUGAGGAGGAAGAGAAGAAAGACGAAGAGCAAAAAGACCUAUCCAUAGCUCCAUACAUGCUUGAGGAAUGUUUAAUUGACCAAGCGCCUAUAAUUUCUAAAGAUGAGAAAAAAGAGGACCAGUUCCUCCAGUUGUUUAAAUGAGUUACAGGUUGGUUUGCAAGAAGGGGAAUGUUGUGGUUUUGCGACUACAAAGAUUUCAGGAUCCAACCAUAUGACCAUCAAGAAAUGCUCCUCCCUGGAUGUUGUGAUAGAUAACGGUAUGUUCAAUACGCUCCAUGACAAAGUGAAACCGAGAACUGUUUCCAAUAAAGAAUAAGAGGAUGAUGAGGACACAACUAGCUCGGAUAUAACCAUGACUACCUUAUGUAUUAAUCAACCAAAGGUGCAUAUAUUCUAUAUUAGAUUUACAUGUUAUAUAUUUGAACAAACGUUGCUACACAAUGAGUUUCGUGUGUUUUUGUUUGCAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
87.2%
ME_num:
MEP:
12.6%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.93
Avg Expression:
1.26
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 5.139553187739 | 0.00094080762314538 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | 6.238179346876 | 4.32671825399707e-06 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | 4.72716764293782 | 0.011138871288887 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | 4.57775650317378 | 0.0042070730216726 |
| 5 | Nipponbare // leaf // H2O_control--/--Nipponbare // leaf // Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.35791998832099 | 0.0185459688866364 |
| 6 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_BLS279 | 4.8755443277348 | 0.01850690549098 |
| 7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hA | 5.97155274533128 | 4.89949870189465e-05 |
| 8 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_B8_12 | 4.50355540836415 | 0.0100370122540227 |
| 9 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7341 | 4.45713179205319 | 0.0357765881142698 |
| 10 | Nipponbare // leaf // "wild_type,control,2"--/--Nipponbare // leaf // "wild_type,drought,2" | 5.45879314600606 | 0.0346681924544469 |
| 11 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7342 | 4.34462898822039 | 0.0447584971371725 |
| 12 | Nipponbare // leaf // control--/--Nipponbare // leaf // drought | 5.4586836040274 | 0.0347629641392307 |
| 13 | Nipponbare // leaf // "wild_type,control,1"--/--Nipponbare // leaf // "wild_type,drought,1" | 5.45864475452883 | 0.0347491876746469 |
| 14 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | 3.75234370696942 | 0.0425675063756105 |