Chr:
Chr2
Start:
14515668
End:
14523785
Strand:
-
Ref_name:
OSA-LNCN2958
Sequence
(OSA-LNCN2958.1):
CUGUUGUUUGCUACUAAUGAGUCAAGUUGGAGAUAGCUUGGUCUCAGAAUAUGGUUUCUUUGUUUAUUUCAUGUGUAGGUGACUCGAUGUCUCGGGAGAGUAUUUGCGGUGAUGGACCGGGAGUCGGCUUGGGGAUAAGAUGACGUCCGUGGUGGUCAGAGAUCAUGCGGGAUACUUAGGCUAGAGUUGAUGCACGUGGUUGAUGGACAUUCCAUAUGGCAUACGAUGGAGGUAUUGUGUGCGUAUGGGAUGCGGAGUCGAAUUUGGAAGGAGUCCAAAUUUGGUACGAUUGGUUAUGUAAAGUUUCUUUCUUGUACUAGAGGGUUUCCUAAGGUGUUUAGGACUCUUAGUAUGAGUUUGGUUCGUGGCUUUAGGCUGCCUACCUC
Sequence
(OSA-LNCN2958.2):
CUGUUGUUUGCUACUAAUGAGUCAAGUUGGAGAUAGCUUGGUCUCAGAAUAUGGUUUCUUUGUUUAUUUCAUGUGUAGGUGACUCGAUGUCUCGGGAGAGUAUUUGCGGUGAUGGACCGGGAGUCGGCUUGGGGAUAAGAUGACGUCCGUGGUGGUCAGAGAUCAUGCGGGAUACUUAGGCUAGAGUUGAUGCACGUGGUUGAUGGACAUUCCAUAUGGCAUACGAUGGAGGUAUUGUGUGCGUAUGGGAUGCAGAGU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
88.41%
ME_num:
MEP:
9.76%
HE_num:
HEP:
1.63%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.94
Avg Expression:
1.78
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // Paclobutrazol (PB) | 7.21218195930317 | 0.000820953198583899 |
2 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA) | 6.84861897041208 | 0.0121594449963389 |