Chr:
Chr2
Start:
7590890
End:
7591851
Strand:
.
Ref_name:
OSA-LNCN2818
Sequence
(OSA-LNCN2818.1):
UCUUAAUCUAGAGACGGUACAGUACAGAAACACACAACACAUAUAUACGUGUAUAUAAAGUACAUCCACGCAAAAGAAGAAAAGCAAGAAAAAAAAACCACAAAAUAUAUACAUGUGAGCACGUACUCCAUUGAUCUCUUUUUUAGAUCUUUUACAUAAACACUUGAAUAGUAUACGUACUUGACAUCAUGCAACCAAACGUAUAUUUAUACGAGUACACGUACACAGGACACACGGAUAUAUACUGAUUAAGACAUGUAAUUAAUCGAUUAAUUAAUUCUUAAUUCAUACCAAGCGUCCAUUGCCCAUUAUUGCAAGCUUACCCUGCUCACGGAAGAUGAACAGAUGAUGAUGAUCUAGGCCAGCUACGGCGCGCCGCCGCCCACCGUCGCCGUCUUCUUCUCCUUCUCCGGCGCGUCCGCGUCUACGGCGACGUGCCCCCGGCUGCUCGGCCCGGACGGCGGGAUGCGCCAUGACCGCCAGUCGAGGUCGUCGUCGCCGUCAUCCCCGCCGCCGCCGCCGCCGCCGUGCUCCUUCCUCCCCGGCCGAUGGCGAAGCACGCGGCGCCACGGCACCUCCGCCGCCGCCGACGCCAUGGCAUGCCGGCGCUGAUCAUCUGCUGCUCCUUCCUCUGCGCUCGCCUGCAGGAAGGCUAGGCCGGCGGCGGCCAUGGCCGCCAUGGCCAGAAUGAGAGCUAAGAGCUUCUUCGAGCUCAUCAUCGCUUGCAUAUUGGAGUAGUAUAUAUUAAUAUAGGCAAUAAAUAUAUUCACACUACUAAACUAUAGCUAGUUAACUAUAUGAAAUAUGAUCGAUCUUAAGUUUAUAUUUGACCCUAGAGGUUUUCAAAUGUGGCGAUAGAUUGCAUUGAUCGAGAAAUGGGGGCAUAUAUAUAUACACACACACACUGACACACAAAAGAAGAGAGCAAUAAAAAUGCAAUUAGGAGAGAGAGAGAGAUGUUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
70.33%
ME_num:
MEP:
29.27%
HE_num:
HEP:
0.2%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.79
Avg Expression:
1.53
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | 9311 // leaf // control--/--9311 // leaf // salt | 2.14772644573342 | 0.00765011143331009 |
| 2 | 9L136 // leaf // control--/--9L136 // leaf // salt | 2.1122263667902 | 0.00116634711037863 |