Chr:
Chr2
Start:
4556852
End:
4558349
Strand:
-
Ref_name:
OSA-LNCN2753
Sequence
(OSA-LNCN2753.1):
CAACUGACGACCAACUGUGGGCUGAUGUGGCAACUGCCCCUGAAAACAACUAGGGAAGAAAGCCACCACUACAACUCCACGGAGAAACAACCCAUCUGCUCGCAAGCAUGGCCAAUUGGAUCGCCCCAUCAUCCAUCGCCGACGUUCGUCGCAAAUCGCAAAGUGCCAUAUGAUGCUCCCAAAGUCCCAAUUGGGGGCCAUGGCUUCUCCGCCCCCUGCCAGCGACGACACGACGACAAGCAGCUGCAGACCACACCACCACAUCUCGGCAACACAUCUCCUCGAUCAGCGACGUGACCAUCGCGGUCAUGUGUUGUAUGUACUCCUGCUACGCUCAUAGUCUUCUAACCAUGCAAAUUAUGAGAAAUACCUGGGGGUCUUUCGACUAACUCCACAAGACGGUGGGCUAGACGACCUGCGUUUGAACCUCAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
93.09%
ME_num:
MEP:
6.3%
HE_num:
HEP:
0.41%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.93
Avg Expression:
1.49
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | 4.97391346372484 | 0.0449993446252628 |