Chr:
Chr2
Start:
342193
End:
342426
Strand:
.
Ref_name:
OSA-LNCN2672
Sequence
(OSA-LNCN2672.1):
CUGAUUAGGAUCUCUCACCCCCACUGUCAGCCCUAUCUGUCACCCUGCCACUAAUCCGUGGCUUAGAUGGUGUGGACGUUGCCUCGUCACCCUCCCGCUCUGCAGCCACCAAACAUUCCCUCUAACCCUAGCGAACUUUCCUAGCUAGCCCCCUUAGACCAUAAACCCUAACUGAUCGAUCCACCGCUAGUUACUGUAGUGGGAGAAUCGAGGAGCCACCGCUAGAAAUCCCCC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
88.82%
ME_num:
MEP:
7.72%
HE_num:
HEP:
3.25%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.98
Avg Expression:
2.84
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | 1.38615880405675 | 0.00826635973514153 |
| 2 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | 1.93096864502407 | 0.0154111487299146 |