Chr:
Chr12
Start:
12440346
End:
12441189
Strand:
+
Ref_name:
OSA-LNCN2268
Sequence
(OSA-LNCN2268.1):
UGCUGGCGGCGACCUCCUGCUCGGCAGGGGGUUUCUUCUGCCGGUGGCGGGUCUCGUGCUCAUGUGCGGCGAUGUGCGGAUGUGGAGUUGGUAUGGCUGCUUGUGAGACGUCUUGGACUAAUCUAUGGUCAUCGAUGUGGGGGUGCUUGUGUGGGUGAUGUGAAGAUGCUGGUGAAAGCCUUGCCGUGCCUUUGGCCGGUUCGACGACGACGACGCCCGCUGGCGCCGUUUCCCUUCUUGGAGGCGUUGUCAUGGCGUUCUUUCAUAUCCCCGCAAUCUCCAGCUUUCAUACCUUAGUUCGGCGAGGCUUUCGUCUUCUUGGGUCCGUUUCUUUCUUGUGGUCGGCGACAAGCUCUUCGGUUGUUUCUGCUGAUGAAGUCGAAGCUGCUUGCUGAUGGGGUGCGGCGACGUUUGGCAACGAUGACAUGUUGCAGUCUCUUCCAAGGAGUUCUGGUGUUGGCUGUGUGAAGAAAGUGGCUCCUCGGUGGCUUGGCUGAUGUCCAUUGUUGGAGGUCGGAAUUGCUUUUCGCUUUGGCGACCUUCAUGCCUUCAAUGUCGUUGCGGUUGUGAAGUUGGCGCUGCUGGUCGCUUGGGCGGCUAGCUCGGCAACGAUAACACCUCUUCUGCGAUUUGGGAGCUGUUGUGUCGCUUUUGUGUUUAGCCUAGCGGCGACGUCCUGUGUUUGGGCUCCGCUGUCAUUGUUAGAUCUAUAGCGGUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
33.33%
ME_num:
MEP:
33.54%
HE_num:
HEP:
32.93%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.91
Avg Expression:
147.29
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | -9.62368462543264 | 4.61902483250847e-09 |
| 2 | Nipponbare // root // "mock,1_day"--/--Nipponbare // root // "auxin(50CM_2,4_D),1_day" | -2.4645240376494 | 1.2599276290612e-05 |
| 3 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | -3.85459153149215 | 0.0343941727209568 |
| 4 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 1.29581281847631 | 0.0266191857414028 |
| 5 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -2.80311822258277 | 0.00399137787800453 |
| 6 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -1.23163369191277 | 1.29396408322793e-10 |
| 7 | 9L136 // leaf // control--/--9L136 // leaf // salt | -1.13372204755457 | 0.0285044691803056 |
| 8 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -2.94072731208761 | 0.000422279559274877 |