Chr:
Chr12
Start:
11132126
End:
11134124
Strand:
-
Ref_name:
OSA-LNCN2247
Sequence
(OSA-LNCN2247.1):
AAAGGAAAUAAGACAAGCAUAUUUUCAGGAAAAGCAAAUGUUGCUAUUGAAAUGUUAGUCAUAAGAAUAUUAAGAAGAAAGUCCGAUUAAAACCUUUUACACAAACAUGUAUGUUUAUUUUAAGGUCCAGUUUGCUUGGUACCAUCCAAAAAAAUCAUCCGAGUUGGAGAAUCCAUAUCACACCAACUUUUGGGGCUCACUUUUUGUAAGUAAUUGAUUUUUUUAGCAGACUUCUGUUUUUUUUUUCUAGCCAGGAGUACUUUUUUUUUGUUCUAGAUAUUGAGUUUUUGUAGGUCCAUUGUUUUUCUUUAGCCAUAAUGAGUUACAUGCUGGAAGGAGGAACAAAAAUAUCUGAACACAAAAAAAAAAAGAUCUCGCUGGAAACACGUAAUGUAUGAUUGUAUAUGCAUAGCUUAUUAAGUUAUGGUAGAAAUACAAAUUUUCUCCAGAUACUGCAGUAAGGUAGAAAUACAAAUUAAACAAAUACAGAACCAUCCUAAACACAUAAAAUUAAAUAGCAACACAUGAGACUAUACAAAGUUGUAAAAACAUAAAUACUUACUCGUCAGAUUUCCUCUGCAUUGUUUGUAGCCCAGUUUCACAUCAGC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
79.88%
ME_num:
MEP:
18.09%
HE_num:
HEP:
1.83%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
2nd_leaf
Tau :
0.86
Avg Expression:
2.57
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | 9311 // leaf // control--/--9311 // leaf // salt | 2.45395677646366 | 2.2354649025734e-15 |
| 2 | 9L136 // leaf // control--/--9L136 // leaf // salt | 2.14753699216193 | 5.20002692577919e-16 |