Chr:
Chr12
Start:
1011634
End:
1016914
Strand:
-
Ref_name:
OSA-LNCN2032
Sequence
(OSA-LNCN2032.1):
CUGAUUUGUGUGGUCCACAGAGUCAAGAUCAGUACACAAAUUAAUUAUGAUUCUGUUCGACAAGAAUGACUCAACUAGCAACAUUUAGAACUAUAAAUGAUAACAAUAAGUUCUCAAGGACACCUAAAUUGGUUGCCUUGCCUUCAUGGUUUUUGCAAGUACAGUGGGACAUAUCUAUUGCAGUCCACUACUAUGUGAUCUCUAGUAUGAACUGUGUAUAGAUUGCAGCCAUUUCAAUUUAAUAAUCAACAUUGGUGGCACUUAGAACUAGAAAGCUGAGACCUUUUGGCAUGAAAAGUUGGUCAUGAUGAUAAGAACUUUUAGCUCGUUCAUAGUGAUCCACAAACCAAAUGGAGGAGAAAUCUUUCCCACUUCUCGGAUCACCAAAGACCAUGGAGAAGCUUGAUACCACAGAACCACUAGAAAGUUGCAACCUUUCUAAGCCUAAAAAGUUGGCCAUAAUGACAUACUUUUAGGGCUCCAAAACGCAAAUCUUUUUUUACUCCUCCUUAAUCAUCCUAUGGUGAUCUAGGGCUAGUACUACUAACCACUGAUAUGAUGAUGCAUAGAUAGAGUAUACUACUAGGUCACAAUGUCAAUGAGAAGUAUAGGGUGUAAAGUAGCCAUGAUUCCGGGGGGUCCCGAGUUGACAAGGGAAGAGAGAAGAAAAGUGUAGUACCUCU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
4.07%
ME_num:
MEP:
47.56%
HE_num:
HEP:
48.17%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.62
Avg Expression:
13.63
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | 1.84833022016697 | 0.0341730852458414 |