Chr:
Chr11
Start:
21339599
End:
21344005
Strand:
-
Ref_name:
OSA-LNCN1795
Sequence
(OSA-LNCN1795.1):
CCGAAAGUCUAGUUUGCUUCCCUGCUACAGUGGCAUCUUCAAUCUCCAGCCGGCUGGAGACAGAGCCCGAGCCAGCCGCACAGUACCUGUAUAGCCGCGGUUUUCCCCUCCAAAUCCAACCUUUUCUCUUGUGUUUUCCUAAAAUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCCUCUCCCCCAAGAAUCGGAGCAAACCGUUGAGUAUCUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUAUUUCCCGGAUCGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCCUAGUCCUCCUCUUUCGUUUGCCCCCUCUCCCGUGGUCUCCCGUGUCCCGUAGCCUUGCCGCCACCACCGCCUAGCUCACCGGUCGCCGCCGGCCAUCUCCGGCGAGGUAGCGCCGCCGUCUCCAUCGUCGUCGCCGGUCGCCGUCACCACCGUUGGGUGCGCUGUGGUGAGAGGAAGCUCGGCCACCCUUCCUUUUCCGUCGCCGGUCACCGGAGCUCCGCCGCCCCGUGCAAGCCGAGUCGCCGCCGCCGCCCCUUCGUCGCCGGCCGUCGUCGGUGGUCGUCCGGUGUGUUGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGCGAGUGCGCCGGAAGUAUUCAGGAAGAUUAAUUGAAGACCGAUUAUUGCAAGAUAAAGGAUCCAGAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUCUUUCCUUUGAUCAAAUCUAAUAUCCUGGAGUGCUAGAAAGCAAGCCACAGUAUCCAGGUCUAGUACAUAAGCAGAGUAUAAAGCAGUUGCUAAUGCUACAGCUGAGGCGGAGCCGGCGACGAUCAUGGCGAUGAAGAUCUUGGCAUCCGCAGAGGCGGAGGCGAGGAUGAAGCGUCGAAGGCCCCCGUAGGUCUCCGAUGCACGCUUGCAGAUCGGUUUUUUUUGGCAUGUCUCAUGCCUGUAGAUCGAUCUGUUUGCGGACGUGCAUGCAUGCAUGCAUGCCAUCGUGGUGGGCGCGAGGCCGGCCGGUCGCCCGGCCCCUGCAUACGGGCCGGCCCGUGCGCAUGGCUUACGCGAUCAGCGGCAUGGCCGAAGCCCGCCGUUCUGCGGCGAAUCGCUUGAUCUCGAUCCCCCAUCCAUACAUGCCCGCGUGCGGCAACAUCGGCGGCGGCAGCGGUUGCCUGCGAUCGGCAAGGCGACGCGACGACGAUGUUGAUCAUCAGACCUCAUCGACCGGCACAAACAUGCAAGCCAAACAACCAACAGAUUAGAUUCAUAAUUUGUAAUCCAAAAUCAAUCUAGCUAAUUAAUUAGCAAGGACAAAAAGUGAUUCUCUGUAGAUGUGAUGCAUGUGUUGACGAUAUGAUUCAAUCAGUGGCGUAGCCAGGGGUAGUCCCGGUGGGCUCGGGACUACCCCCGAAUUUGGCCCACGAACCCUCACCCCCAAUAUUUUAGCCUAGACUCAAGCCUAAAGAAGCAAGCCCAAUAAGAAACUAGAAGCACAGGGGCAUGACUCAUCACUUCAUCAGUGUGCAGCCGUCAC
Sequence
(OSA-LNCN1795.2):
CCGAAAGUCUAGUUUGCUUCCCUGCUACAGUGGCAUCUUCAAUCUCCAGCCGGCUGGAGACAGAGCCCGAGCCAGCCGCACAGUACCUGUAUAGCCGCGGUUUUCCCCUCCAAAUCCAACCUUUUCUCUUGUGUUUUCCUAAAAUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCCUCUCCCCCAAGAAUCGGAGCAAACCGUUGAGUAUCUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUAUUUCCCGGAUCGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCCUAGUCCUCCUCUUUCGUUUGCCCCCUCUCCCGUGGUCUCCCGUGUCCCGUAGCCUUGCCGCCACCACCGCCUAGCUCACCGGUCGCCGCCGGCCAUCUCCGGCGAGGUAGCGCCGCCGUCUCCAUCGUCGUCGCCGGUCGCCGUCACCACCGUUGGGUGCGCUGUGGUGAGAGGAAGCUCGGCCACCCUUCCUUUUCCGUCGCCGGUCACCGGAGCUCCGCCGCCCCGUGCAAGCCGAGUCGCCGCCGCCGCCCCUUCGUCGCCGGCCGUCGUCGGUGGUCGUCCGGUGUGUUGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGCGAGUGCGCCGGAAGUAUUCAGGAAGAUUAAUUGAAGACCGAUUAUUGCAAGGAUCCAGAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUCUUUCCUUUGCGGAGCCGGCGACGAUCAUGGCGAUGAAGAUCUUGGCAUCCGCAGAGGCGGAGGCGAGGAUGAAGCGUCGAAGGCCCCCGUAGGUCUCCGAUGCACGCUUGCAGAUCGGUUUUUUUUGGCAUGUCUCAUGCCUGUAGAUCGAUCUGUUUGCGGACGUGCAUGCAUGCAUGCAUGCCAUCGUGGUGGGCGCGAGGCCGGCCGGUCGCCCGGCCCCUGCAUACGGGCCGGCCCGUGCGCAUGGCUUACGCGAUCAGCGGCAUGGCCGAAGCCCGCCGUUCUGCGGCGAAUCGCUUGAUCUCGAUCCCCCAUCCAUACAUGCCCGCGUGCGGCAACAUCGGCGGCGGCAGCGGUUGCCUGCGAUCGGCAAGGCGACGCGACGACGAUGUUGAUCAUCAGACCUCAUCGACCGGCACAAACAUGCAAGCCAAACAACCAACAGAUUAGAUUCAUAAUUUGUAAUCCAAAAUCAAUCUAGCUAAUUAAUUAGCAAGGACAAAAAGUGAUUCUCUGUAGAUGUGAUGCAUGUGUUGACGAUAUGAUUCAAUCAGUGGCG
Sequence
(OSA-LNCN1795.3):
CCGAAAGUCUAGUUUGCUUCCCUGCUACAGUGGCAUCUUCAAUCUCCAGCCGGCUGGAGACAGAGCCCGAGCCAGCCGCACAGUACCUGUAUAGCCGCGGUUUUCCCCUCCAAAUCCAACCUUUUCUCUUGUGUUUUCCUAAAAUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCCUCUCCCCCAAGAAUCGGAGCAAACCGUUGAGUAUCUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUAUUUCCCGGAUCGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCCUAGUCCUCCUCUUUCGUUUGCCCCCUCUCCCGUGGUCUCCCGUGUCCCGUAGCCUUGCCGCCACCACCGCCUAGCUCACCGGUCGCCGCCGGCCAUCUCCGGCGAGGUAGCGCCGCCGUCUCCAUCGUCGUCGCCGGUCGCCGUCACCACCGUUGGGUGCGCUGUGGUGAGAGGAAGCUCGGCCACCCUUCCUUUUCCGUCGCCGGUCACCGGAGCUCCGCCGCCCCGUGCAAGCCGAGUCGCCGCCGCCGCCCCUUCGUCGCCGGCCGUCGUCGGUGGUCGUCCGGUGUGUUGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGCGAGUGCGCCGGAAGUAUUCAGGAAGAUUAAUUGAAGACCGAUUAUUGCAAGGAUCCAGAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUCUUUCCUUUGAUCAAAUCUAAUAUCCUGGAGUGCUAGAAAGCAAGCCACAGUAUCCAGGUCUAGUACAUAAGCAGAGUAUAAAGCAGUUGCUAAUGCUACAGCUGAGGCGGAGCCGGCGACGAUCAUGGCGAUGAAGAUCUUGGCAUCCGCAGAGGCGGAGGCGAGGAUGAAGCGUCGAAGGCCCCCGUAGGUCUCCGAUGCACGCUUGCAGAUCGGUUUUUUUUGGCAUGUCUCAUGCCUGUAGAUCGAUCUGUUUGCGGACGUGCAUGCAUGCAUGCAUGCCAUCGUGGUGGGCGCGAGGCCGGCCGGUCGCCCGGCCCCUGCAUACGGGCCGGCCCGUGCGCAUGGCUUACGCGAUCAGCGGCAUGGCCGAAGCCCGCCGUUCUGCGGCGAAUCGCUUGAUCUCGAUCCCCCAUCCAUACAUGCCCGCGUGCGGCAACAUCGGCGGCGGCAGCGGUUGCCUGCGAUCGGCAAGGCGACGCGACGACGAUGUUGAUCAUCAGACCUCAUCGACCGGCACAAACAUGCAAGCCAAACAACCAACAGAUUAGAUUCAUAAUUUGUAAUCCAAAAUCAAUCUAGCUAAUUAAUUAGCAA
Sequence
(OSA-LNCN1795.4):
CCGAAAGUCUAGUUUGCUUCCCUGCUACAGUGGCAUCUUCAAUCUCCAGCCGGCUGGAGACAGAGCCCGAGCCAGCCGCACAGUACCUGUAUAGCCGCGGUUUUCCCCUCCAAAUCCAACCUUUUCUCUUGUGUUUUCCUAAAAUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCCUCUCCCCCAAGAAUCGGAGCAAACCGUUGAGUAUCUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUAUUUCCCGGAUCGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCCUAGUCCUCCUCUUUCGUUUGCCCCCUCUCCCGUGGUCUCCCGUGUCCCGUAGCCUUGCCGCCACCACCGCCUAGCUCACCGGUCGCCGCCGGCCAUCUCCGGCGAGGUAGCGCCGCCGUCUCCAUCGUCGUCGCCGGUCGCCGUCACCACCGUUGGGUGCGCUGUGGUGAGAGGAAGCUCGGCCACCCUUCCUUUUCCGUCGCCGGUCACCGGAGCUCCGCCGCCCCGUGCAAGCCGAGUCGCCGCCGCCGCCCCUUCGUCGCCGGCCGUCGUCGGUGGUCGUCCGGUGUGUUGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGCGAGUGCGCCGGAAGUAUUCAGGAAGAUUAAUUGAAGACCGAUUAUUGCAAGGAUCCAGAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUCUUUCCUUUGUAAGAUCAAAUCUAAUAUCCUGGAGUGCUAGAAAGCAAGCCACAGUAUCCAGGUCUAGUACAUAAGCAGAGUAUAAAGCAGUUGCUAAUGCUACAGCUGAGGCGGAGCCGGCGACGAUCAUGGCGAUGAAGAUCUUGGCAUCCGCAGAGGCGGAGGCGAGGAUGAAGCGUCGAAGGCCCCCGUAGGUCUCCGAUGCACGCUUGCAGAUCGGUUUUUUUUGGCAUGUCUCAUGCCUGUAGAUCGAUCUGUUUGCGGACGUGCAUGCAUGCAUGCAUGCCAUCGUGGUGGGCGCGAGGCCGGCCGGUCGCCCGGCCCCUGCAUACGGGCCGGCCCGUGCGCAUGGCUUACGCGAUCAGCGGCAUGGCCGAAGCCCGCCGUUCUGCGGCGAAUCGCUUGAUCUCGAUCCCCCAUCCAUACAUGCCCGCGUGCGGCAACAUCGGCGGCGGCAGCGGUUGCCUGCGAUCGGCAAGGCGACGCGACGACGAUGUUGAUCAUCAGACCUCAUCGACCGGCACAAACAUGCAAGCCAAACAACCAACAGAUUAGAUUCAUAAUUUGUAAUCCAAAAUCAAUCUAGCUAAUUAAUUAGCAA
Sequence
(OSA-LNCN1795.5):
CCGAAAGUCUAGUUUGCUUCCCUGCUACAGUGGCAUCUUCAAUCUCCAGCCGGCUGGAGACAGAGCCCGAGCCAGCCGCACAGUACCUGUAUAGCCGCGGUUUUCCCCUCCAAAUCCAACCUUUUCUCUUGUGUUUUCCUAAAAUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCCUCUCCCCCAAGAAUCGGAGCAAACCGUUGAGUAUCUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUAUUUCCCGGAUCGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCCUAGUCCUCCUCUUUCGUUUGCCCCCUCUCCCGUGGUCUCCCGUGUCCCGUAGCCUUGCCGCCACCACCGCCUAGCUCACCGGUCGCCGCCGGCCAUCUCCGGCGAGGUAGCGCCGCCGUCUCCAUCGUCGUCGCCGGUCGCCGUCACCACCGUUGGGUGCGCUGUGGUGAGAGGAAGCUCGGCCACCCUUCCUUUUCCGUCGCCGGUCACCGGAGCUCCGCCGCCCCGUGCAAGCCGAGUCGCCGCCGCCGCCCCUUCGUCGCCGGCCGUCGUCGGUGGUCGUCCGGUGUGUUGGCGGAGCCGGCGACGAUCAUGGCGAUGAAGAUCUUGGCAUCCGCAGAGGCGGAGGCGAGGAUGAAGCGUCGAAGGCCCCCGUAGGUCUCCGAUGCACGCUUGCAGAUCGGUUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
58.94%
ME_num:
MEP:
39.63%
HE_num:
HEP:
1.22%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.91
Avg Expression:
2.56
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -1.57982456777356 | 2.22300801057666e-06 |
2 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | 1.22737154585816 | 0.00727255319065341 |
3 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 1.59997734391053 | 9.81939584679735e-06 |