OSA-LNCN1795


Function Link


Basic Info

Chr:

Chr11

Start:

21339599

End:

21344005

Strand:

-

Ref_name:

OSA-LNCN1795

Sequence
(OSA-LNCN1795.1):

CCGAAAGUCUAGUUUGCUUCCCUGCUACAGUGGCAUCUUCAAUCUCCAGCCGGCUGGAGACAGAGCCCGAGCCAGCCGCACAGUACCUGUAUAGCCGCGGUUUUCCCCUCCAAAUCCAACCUUUUCUCUUGUGUUUUCCUAAAAUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCCUCUCCCCCAAGAAUCGGAGCAAACCGUUGAGUAUCUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUAUUUCCCGGAUCGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCCUAGUCCUCCUCUUUCGUUUGCCCCCUCUCCCGUGGUCUCCCGUGUCCCGUAGCCUUGCCGCCACCACCGCCUAGCUCACCGGUCGCCGCCGGCCAUCUCCGGCGAGGUAGCGCCGCCGUCUCCAUCGUCGUCGCCGGUCGCCGUCACCACCGUUGGGUGCGCUGUGGUGAGAGGAAGCUCGGCCACCCUUCCUUUUCCGUCGCCGGUCACCGGAGCUCCGCCGCCCCGUGCAAGCCGAGUCGCCGCCGCCGCCCCUUCGUCGCCGGCCGUCGUCGGUGGUCGUCCGGUGUGUUGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGCGAGUGCGCCGGAAGUAUUCAGGAAGAUUAAUUGAAGACCGAUUAUUGCAAGAUAAAGGAUCCAGAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUCUUUCCUUUGAUCAAAUCUAAUAUCCUGGAGUGCUAGAAAGCAAGCCACAGUAUCCAGGUCUAGUACAUAAGCAGAGUAUAAAGCAGUUGCUAAUGCUACAGCUGAGGCGGAGCCGGCGACGAUCAUGGCGAUGAAGAUCUUGGCAUCCGCAGAGGCGGAGGCGAGGAUGAAGCGUCGAAGGCCCCCGUAGGUCUCCGAUGCACGCUUGCAGAUCGGUUUUUUUUGGCAUGUCUCAUGCCUGUAGAUCGAUCUGUUUGCGGACGUGCAUGCAUGCAUGCAUGCCAUCGUGGUGGGCGCGAGGCCGGCCGGUCGCCCGGCCCCUGCAUACGGGCCGGCCCGUGCGCAUGGCUUACGCGAUCAGCGGCAUGGCCGAAGCCCGCCGUUCUGCGGCGAAUCGCUUGAUCUCGAUCCCCCAUCCAUACAUGCCCGCGUGCGGCAACAUCGGCGGCGGCAGCGGUUGCCUGCGAUCGGCAAGGCGACGCGACGACGAUGUUGAUCAUCAGACCUCAUCGACCGGCACAAACAUGCAAGCCAAACAACCAACAGAUUAGAUUCAUAAUUUGUAAUCCAAAAUCAAUCUAGCUAAUUAAUUAGCAAGGACAAAAAGUGAUUCUCUGUAGAUGUGAUGCAUGUGUUGACGAUAUGAUUCAAUCAGUGGCGUAGCCAGGGGUAGUCCCGGUGGGCUCGGGACUACCCCCGAAUUUGGCCCACGAACCCUCACCCCCAAUAUUUUAGCCUAGACUCAAGCCUAAAGAAGCAAGCCCAAUAAGAAACUAGAAGCACAGGGGCAUGACUCAUCACUUCAUCAGUGUGCAGCCGUCAC

Sequence
(OSA-LNCN1795.2):

CCGAAAGUCUAGUUUGCUUCCCUGCUACAGUGGCAUCUUCAAUCUCCAGCCGGCUGGAGACAGAGCCCGAGCCAGCCGCACAGUACCUGUAUAGCCGCGGUUUUCCCCUCCAAAUCCAACCUUUUCUCUUGUGUUUUCCUAAAAUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCCUCUCCCCCAAGAAUCGGAGCAAACCGUUGAGUAUCUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUAUUUCCCGGAUCGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCCUAGUCCUCCUCUUUCGUUUGCCCCCUCUCCCGUGGUCUCCCGUGUCCCGUAGCCUUGCCGCCACCACCGCCUAGCUCACCGGUCGCCGCCGGCCAUCUCCGGCGAGGUAGCGCCGCCGUCUCCAUCGUCGUCGCCGGUCGCCGUCACCACCGUUGGGUGCGCUGUGGUGAGAGGAAGCUCGGCCACCCUUCCUUUUCCGUCGCCGGUCACCGGAGCUCCGCCGCCCCGUGCAAGCCGAGUCGCCGCCGCCGCCCCUUCGUCGCCGGCCGUCGUCGGUGGUCGUCCGGUGUGUUGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGCGAGUGCGCCGGAAGUAUUCAGGAAGAUUAAUUGAAGACCGAUUAUUGCAAGGAUCCAGAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUCUUUCCUUUGCGGAGCCGGCGACGAUCAUGGCGAUGAAGAUCUUGGCAUCCGCAGAGGCGGAGGCGAGGAUGAAGCGUCGAAGGCCCCCGUAGGUCUCCGAUGCACGCUUGCAGAUCGGUUUUUUUUGGCAUGUCUCAUGCCUGUAGAUCGAUCUGUUUGCGGACGUGCAUGCAUGCAUGCAUGCCAUCGUGGUGGGCGCGAGGCCGGCCGGUCGCCCGGCCCCUGCAUACGGGCCGGCCCGUGCGCAUGGCUUACGCGAUCAGCGGCAUGGCCGAAGCCCGCCGUUCUGCGGCGAAUCGCUUGAUCUCGAUCCCCCAUCCAUACAUGCCCGCGUGCGGCAACAUCGGCGGCGGCAGCGGUUGCCUGCGAUCGGCAAGGCGACGCGACGACGAUGUUGAUCAUCAGACCUCAUCGACCGGCACAAACAUGCAAGCCAAACAACCAACAGAUUAGAUUCAUAAUUUGUAAUCCAAAAUCAAUCUAGCUAAUUAAUUAGCAAGGACAAAAAGUGAUUCUCUGUAGAUGUGAUGCAUGUGUUGACGAUAUGAUUCAAUCAGUGGCG

Sequence
(OSA-LNCN1795.3):

CCGAAAGUCUAGUUUGCUUCCCUGCUACAGUGGCAUCUUCAAUCUCCAGCCGGCUGGAGACAGAGCCCGAGCCAGCCGCACAGUACCUGUAUAGCCGCGGUUUUCCCCUCCAAAUCCAACCUUUUCUCUUGUGUUUUCCUAAAAUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCCUCUCCCCCAAGAAUCGGAGCAAACCGUUGAGUAUCUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUAUUUCCCGGAUCGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCCUAGUCCUCCUCUUUCGUUUGCCCCCUCUCCCGUGGUCUCCCGUGUCCCGUAGCCUUGCCGCCACCACCGCCUAGCUCACCGGUCGCCGCCGGCCAUCUCCGGCGAGGUAGCGCCGCCGUCUCCAUCGUCGUCGCCGGUCGCCGUCACCACCGUUGGGUGCGCUGUGGUGAGAGGAAGCUCGGCCACCCUUCCUUUUCCGUCGCCGGUCACCGGAGCUCCGCCGCCCCGUGCAAGCCGAGUCGCCGCCGCCGCCCCUUCGUCGCCGGCCGUCGUCGGUGGUCGUCCGGUGUGUUGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGCGAGUGCGCCGGAAGUAUUCAGGAAGAUUAAUUGAAGACCGAUUAUUGCAAGGAUCCAGAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUCUUUCCUUUGAUCAAAUCUAAUAUCCUGGAGUGCUAGAAAGCAAGCCACAGUAUCCAGGUCUAGUACAUAAGCAGAGUAUAAAGCAGUUGCUAAUGCUACAGCUGAGGCGGAGCCGGCGACGAUCAUGGCGAUGAAGAUCUUGGCAUCCGCAGAGGCGGAGGCGAGGAUGAAGCGUCGAAGGCCCCCGUAGGUCUCCGAUGCACGCUUGCAGAUCGGUUUUUUUUGGCAUGUCUCAUGCCUGUAGAUCGAUCUGUUUGCGGACGUGCAUGCAUGCAUGCAUGCCAUCGUGGUGGGCGCGAGGCCGGCCGGUCGCCCGGCCCCUGCAUACGGGCCGGCCCGUGCGCAUGGCUUACGCGAUCAGCGGCAUGGCCGAAGCCCGCCGUUCUGCGGCGAAUCGCUUGAUCUCGAUCCCCCAUCCAUACAUGCCCGCGUGCGGCAACAUCGGCGGCGGCAGCGGUUGCCUGCGAUCGGCAAGGCGACGCGACGACGAUGUUGAUCAUCAGACCUCAUCGACCGGCACAAACAUGCAAGCCAAACAACCAACAGAUUAGAUUCAUAAUUUGUAAUCCAAAAUCAAUCUAGCUAAUUAAUUAGCAA

Sequence
(OSA-LNCN1795.4):

CCGAAAGUCUAGUUUGCUUCCCUGCUACAGUGGCAUCUUCAAUCUCCAGCCGGCUGGAGACAGAGCCCGAGCCAGCCGCACAGUACCUGUAUAGCCGCGGUUUUCCCCUCCAAAUCCAACCUUUUCUCUUGUGUUUUCCUAAAAUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCCUCUCCCCCAAGAAUCGGAGCAAACCGUUGAGUAUCUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUAUUUCCCGGAUCGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCCUAGUCCUCCUCUUUCGUUUGCCCCCUCUCCCGUGGUCUCCCGUGUCCCGUAGCCUUGCCGCCACCACCGCCUAGCUCACCGGUCGCCGCCGGCCAUCUCCGGCGAGGUAGCGCCGCCGUCUCCAUCGUCGUCGCCGGUCGCCGUCACCACCGUUGGGUGCGCUGUGGUGAGAGGAAGCUCGGCCACCCUUCCUUUUCCGUCGCCGGUCACCGGAGCUCCGCCGCCCCGUGCAAGCCGAGUCGCCGCCGCCGCCCCUUCGUCGCCGGCCGUCGUCGGUGGUCGUCCGGUGUGUUGCUUGUCGUUUCCGUCGUUGCGAAGGUUCGCGAGUGCGCCGGAAGUAUUCAGGAAGAUUAAUUGAAGACCGAUUAUUGCAAGGAUCCAGAAGGAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCUGAAGCCAUCGCUAGACCGUUAAUUCCGCUGCUGUUUUCUUUCCUUUGUAAGAUCAAAUCUAAUAUCCUGGAGUGCUAGAAAGCAAGCCACAGUAUCCAGGUCUAGUACAUAAGCAGAGUAUAAAGCAGUUGCUAAUGCUACAGCUGAGGCGGAGCCGGCGACGAUCAUGGCGAUGAAGAUCUUGGCAUCCGCAGAGGCGGAGGCGAGGAUGAAGCGUCGAAGGCCCCCGUAGGUCUCCGAUGCACGCUUGCAGAUCGGUUUUUUUUGGCAUGUCUCAUGCCUGUAGAUCGAUCUGUUUGCGGACGUGCAUGCAUGCAUGCAUGCCAUCGUGGUGGGCGCGAGGCCGGCCGGUCGCCCGGCCCCUGCAUACGGGCCGGCCCGUGCGCAUGGCUUACGCGAUCAGCGGCAUGGCCGAAGCCCGCCGUUCUGCGGCGAAUCGCUUGAUCUCGAUCCCCCAUCCAUACAUGCCCGCGUGCGGCAACAUCGGCGGCGGCAGCGGUUGCCUGCGAUCGGCAAGGCGACGCGACGACGAUGUUGAUCAUCAGACCUCAUCGACCGGCACAAACAUGCAAGCCAAACAACCAACAGAUUAGAUUCAUAAUUUGUAAUCCAAAAUCAAUCUAGCUAAUUAAUUAGCAA

Sequence
(OSA-LNCN1795.5):

CCGAAAGUCUAGUUUGCUUCCCUGCUACAGUGGCAUCUUCAAUCUCCAGCCGGCUGGAGACAGAGCCCGAGCCAGCCGCACAGUACCUGUAUAGCCGCGGUUUUCCCCUCCAAAUCCAACCUUUUCUCUUGUGUUUUCCUAAAAUUAGUUGAGGGGAAAUAUUCCUCUUAUCCUCCUCUAUCCUCUCCCCCAAGAAUCGGAGCAAACCGUUGAGUAUCUUAUCCGAAUCGAACUCGUUUUCGAGUUUAUCUCCAAAACCGAGUUUUUAUUUCCCGGAUCGAUUUCUUGCGGGAGGAGUCCGAUCUCUUCAAUCCAAGGCUAUAAAUAGGACCCCCUAGUCCUCCUCUUUCGUUUGCCCCCUCUCCCGUGGUCUCCCGUGUCCCGUAGCCUUGCCGCCACCACCGCCUAGCUCACCGGUCGCCGCCGGCCAUCUCCGGCGAGGUAGCGCCGCCGUCUCCAUCGUCGUCGCCGGUCGCCGUCACCACCGUUGGGUGCGCUGUGGUGAGAGGAAGCUCGGCCACCCUUCCUUUUCCGUCGCCGGUCACCGGAGCUCCGCCGCCCCGUGCAAGCCGAGUCGCCGCCGCCGCCCCUUCGUCGCCGGCCGUCGUCGGUGGUCGUCCGGUGUGUUGGCGGAGCCGGCGACGAUCAUGGCGAUGAAGAUCUUGGCAUCCGCAGAGGCGGAGGCGAGGAUGAAGCGUCGAAGGCCCCCGUAGGUCUCCGAUGCACGCUUGCAGAUCGGUUU


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

290

LEP:

58.94%

ME_num:

195

MEP:

39.63%

HE_num:

6

HEP:

1.22%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

shoot

Tau :

0.91

Avg Expression:

2.56

Tip: OSA-LNCN1795 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
1Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated-1.579824567773562.22300801057666e-06
2Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day1.227371545858160.00727255319065341
3Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae1.599977343910539.81939584679735e-06