Chr:
Chr11
Start:
17378119
End:
17382957
Strand:
+
Ref_name:
OSA-LNCN1730
Sequence
(OSA-LNCN1730.1):
AAAUAAUCCGCCUCAAUAAUCCAUGCAAAUAUUUGUUUCGUAUGACUAGCUCAGUCACAAAUAUUGAACAUAUAGGAGAAAAUUCAAUUAAAAUUUUAAAGUUCUAUUUAUUUGUUUUGUAUUAAAGUAAGUUUAUGAAAUCUAAUAAUCAUGAUAUUAUGUCAGUGUCAUUCGUUCAUACUCUCUCUAUCUACUUUUGAUAGUCAUAUUUCAUCUUGGCACACAGACAAGAAUAAGUUAUUCUACUUAUCAUCUAUUUAAACAUGCUACUAGUCAUUCCUCGUAAACAAGCGCUUCAUUAAUAUUUACAUUUCUCGAUGCUGUGUGGAAGAAUAGAGAGUCACGCAUUAAAUCCAAGAAAUUCAUUAAGAUGAUAGGUUGUUGGAUUGAAAUAUGCCUAUCAAAAAUAAAUUUUCCAGAUUUGAAAUAUACUCUCUCCAUACUCGUGAAGGAAUAACUAUCAAAAGUAGAUGGAGGGAGUAUUACUCAACAACACCUUCUCAAGAGUCGUGCCGUUGGGUCCCUUCAAGCUCCUCGGCACCCAUGCCUCCUCUGCUCAUGGCUGCUCGUCUGCUACCACCUAUGCACCGUCAGAGUCCUCGUGCUCACCUCCAAGGAAGAGAAGGGAAGACGGGAUCCGCACGCAUCCCAUGAGCUCACCUCUCCGUCAUCUUCUAUCGAUCUUCUUGCUAUUGGUGUGGAGAGACUGGGUAGGAGUGGUUCCGACGCUAGUUGCCACCACUGUUGUCGCAGCCACCGGCUAUGUAGGGUGCUCACCAACUCAUUGCCUCCUCGCUCCAUGGUCAUAUUGGGGAUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
0.41%
ME_num:
MEP:
26.02%
HE_num:
HEP:
73.37%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.66
Avg Expression:
22.15
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 1.59114423216839 | 0.0118820203791308 |
| 2 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -2.79172737565523 | 0.00110877092091931 |