Chr:
Chr11
Start:
13890625
End:
13915681
Strand:
-
Ref_name:
OSA-LNCN1617
Sequence
(OSA-LNCN1617.1):
GCCGCUGCCGCGCCGUCGCCGUCGCGUCCCGCCUAGGGCCGCGCGUGCGUCCCAUCGCCGCCUCGCGCCGCGCGCCACCACUGCCGCGCAGUCGCCGUCGCCAUCCCGUCGCCGCGCGCGCGUUCCAUCGCCGCCUCGAGCCGUGCCGCUGCUGCGCCGCGUGCCGUCCCGUCGCCUCGCACCCGCUGCCUCGCGCCCCGCGCCGCUGCCACGUGCUGCGUCGCCUUGCGCCCCGAGCCGCGCCGCGCCGUCGUCAUCUCCGCCCGCGCGCCGCGCGCCGUCACAUCGCCGCCGUCACCUCACCCCCCCUCCACCGCCCUUCCCUUCUCUUCCCUCUCCCCCUUAUCCUCUCUUUCCCCUAUAAAGGCCCACCAUUCUCCCCUCUCCCCACUCCAUCCCCUCCUCCUCUCCCUUUUCCCUCCCCAUCUCCACGCGUCGCCGUUGUUGUCCCGCCGCUCCGCCGCCUUCGAGCCACCGCGCCGCCGCCACGAAGCCGCCGCGCUGUGCCGCGCCGUGCGCCGUCGUCGCCGCCGCCGUCGUCGCCGCCGCCGCCGUCGAGCCCGAGGGAGUUGCGGAUCCAAGUGAAGGCCAAGACCCCCAAGACCUUGAGCAAGAAGCGGGAGAUGAAGCUUCCGAGGAUCCCUAUGCCUACUACCAGGAGGGAGAUGAAGACAAUGGCGCUCAGUAGGUCUUAGUACGGUCGUUGCCUGUGGCAAUGGUAUGCCGCUGCCUGAAUUCCGCUGCCUUAUCUAUUUUUGCUUUUGGAUGUAUUCCGGACCGCUCGGUCCGAUGAUUUAAGACAAUGCCUACGGGCUUAUGAUGUAAUAAUUAGCACUAGACUCUCGUGUAUGUGCUUUUGGUAUUUCAGCUAUGAACUCGUGUACCAGACUACUUGAUCCAGGGAAAUGGUACUGUUUACACGAAUGAUUCCUGUUAUAAAAACAGGGGUCCACAGAUAAUUAGCUACGGCAGUUUAUCAUUAAAUCGAUUCAAAAGUCAUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
55.89%
ME_num:
MEP:
35.16%
HE_num:
HEP:
8.74%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
root_meristematic_zone
Tau :
0.82
Avg Expression:
9.69
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| Tip: OSA-LNCN1617 is not a differential expression ncRNA. | |||