Chr:
Chr11
Start:
1286447
End:
1288482
Strand:
+
Ref_name:
OSA-LNCN1366
Sequence
(OSA-LNCN1366.1):
CUCACGAACACUACUUGAUCUUAUCCGAGCUUGCCGUCCGGCGGCGCCGCGGCGGCCGGAGUCGCCUCUCCGACAUUCGCGCCGCCACCGACGUCCUCGUACGGUUGGCGGGAAGGUGGCGCGCUUUGUUGGGGGAAAGAGGCGGGUUCGGUUCCCGUGGCAGUCGCCGGCGGUGAGCGAUGACGACUGCCCGCGGUCGGAGCGCGUGCGAUGAUGGCCGCGCGGGUUCACCCAAACAACAAACAUAUAACAACUGGGCAGGUUUAGCUGCUGUGUAAGCAAAGCAGGAUAACUGCUGAAUAUGACUCUGAACGUUGGUGUGAAGUUGCAACAACUGAAAGCUGGCGAGUAUGUUGAAGAAAACUGAUGCAAUCAUGAAGAUCACAUUUAAUCUUUUCUACUACCAGUUGUUGUCGAUGGCUUCUGCAUUAUUUGUUCCUGAUCUAUCGCUGUUUGUCACCGACUUGAUACUUCCCUUUUAGGUUGACUAAGUCUAGCUUAAGCUUGGUUAUUAGAGGUCUGUUAGUCAGGCUUGGUUGUCUGUAUGAUCACCUGCUCUGCUUUCCCUGUUCCCAAAUGUACUCUGAACAAGAACCAUGUUAUUUCUGUUCAUAUCAAAUGUAUAAAUGGUUACCCUGUUAAAAGAGACCUGUGGUUCUUAUUUUCCUGAUGAUUGCCAGCGGCAAACUGCAGAUUCAGGUAGCUCGUUAGAAUAAUUGCAGAUACAUGCAUAAUUGCAGACAGCUCAUUAGAAUAGAGCUGUAAUACAGAUUUCGCUGCUAUCAGGAUAUGGGAAGAAAGCAAUCUCUGUUCAAGAGUUUGCCCGUGAUUUUUGAGCUUUUCUUGGACCUUAUUUCAGUUCAACAAUAGCG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
3.25%
ME_num:
MEP:
77.24%
HE_num:
HEP:
19.31%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
embryo
Tau :
0.86
Avg Expression:
21.10
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | 1.12867459486168 | 0.000220331068945166 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -1.26112064294381 | 0.00215196718464594 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 1hA | 1.9120431659378 | 3.75754153118852e-17 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hN | 1.88828626760262 | 0.00188601532716191 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -1.52304235876123 | 3.52208736365254e-06 |
| 6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -1.24237163242145 | 2.80149524916892e-05 |
| 7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 1hN | 1.99503765840783 | 8.02471692586574e-18 |