Chr:
Chr10
Start:
19634009
End:
19634450
Strand:
.
Ref_name:
OSA-LNCN1271
Sequence
(OSA-LNCN1271.1):
UAUACAUUUAUCGAUAAAUUUUCUCCUAAAAAUUUAACAGAUAUAAUUAUAGUACAAUCGUGAUGUAAUUACACUGCUAAUUACAUGUAACUUACAAAUAACUUUCAAAAAUCUCUCCGUAACAUGCUAUUUCGGUGAAGCGGAGGUUGUGGAAAUGAAUUCUCUCACAUAUAUACGCACAGUGACUUUUUUCUUGUUCACUUGCAUAAAUCUUGAAACAAAUCUAACAGUUUAAAAUCAUAUGAAAGUUUACAUACAAUUUACAGUGUAAUUACACUACGAUUGUACUGUAAUUACAUCUAUCAAAUAUUUAGGAGAACAUUUGUCGACAAAUAUAUAACAAAAUUGGUACAGAGAUGUUUAAUAUUAUACAGUGUGAUCCCCUUCUUUUACUAUUCAACAGAAUUGAUAGGACCCAUGCAUCAAGUCUGUCGUGGAGUAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
96.14%
ME_num:
MEP:
3.66%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.98
Avg Expression:
0.62
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7341 | 5.06853417476241 | 0.0161184481424206 |
2 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7331 | 5.39205504065604 | 0.00487631670236296 |