Chr:
Chr10
Start:
18770076
End:
18773342
Strand:
+
Ref_name:
OSA-LNCN1258
Sequence
(OSA-LNCN1258.1):
UGGCGUCACUAGCACAGUUUUGAUUUUAUAAAAUUUCAGUGGCACGACUACAAAUAUAAACGAAUUAUUAUGACAUCUAUUUGAAUAAUCACAUUUACAAUGGGAUCCAAUUUACAAUGGGGUAGAUAGAAAAGGGAAAGUCACUGGCUCGAUCUAGGCCGUCGGUUUUGAUCGAUCGGACGGUGAAGAACUGCGUCUCCUCCGACGCUUCACUCCUCUCCUCGCUUCGCCGGCGGCAGCUUCCCGUGCGCCGUGCCCGCCGGCGCCGCCAGCCACCCUCGCCUCGCCGACGGCGCGAUGGGAUGUUAGAGACCCACUCAACAAUAUAAUUUCAGAAAUAGCAGUGCCAAAUCCAACACAGGGAACAACCAAGUCUGUUACAAUAGUGGAGUGGUUUUGAGGUGGAAGAUGGAAGGAUACAAGGGCUAGAAGGUUCUAGUAGCUUCUAGACUAGUAGAGAAGAAGGGAGAUAGAGGAGAGAUCGACAAAGAGGCCAGCCAGCCUCUAGGUCGCCGCCGCUGCUGUUCGCCGCCUUGGCCAAAUGAAUCUGUUCGAUCGAUCUCCUGUAAGCUGCUGCUGCUCAUAUAUCUUUUAGCUUGGGCUUGCUUGGGCUUCUUGGCGAUGGGCUGACCAACCCGUGGUGUAGCCAGCGGCCCAUGUGCAGCCCACCCGAGUCCCUGACAUGGGACAGCGGCCGUUAUGUCUCCGCGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
81.91%
ME_num:
MEP:
16.67%
HE_num:
HEP:
1.22%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.91
Avg Expression:
1.83
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 10.5h | 1.87165839994428 | 0.0495003777688978 |
2 | IR64 // panicle // Dawn--/--IR64 // panicle // Dusk | 2.66414773468868 | 0.00365648966063415 |