Chr:
Chr10
Start:
16312701
End:
16313499
Strand:
.
Ref_name:
OSA-LNCN1216
Sequence
(OSA-LNCN1216.1):
CCCCUGUGCAAAUAUGUGUCCACUUGUGUAUUUGCCCUUUUUUGAGUUCAGCUUUGAACUGAACUUUACAAAUGUUUCGAACUGAACUUUGCUAUACUUGAAAUGUAUAAAAAAUUGACUAGAUUUCAGCAAUAGCUUGACAAAUAUCACAAAAUUUCAACAGGAUUGCAACAUGAUUUCAGCAAUAAUUAGACAAGAUUUCAUUUCACAAAAUUUCAACAUACUUUCAUGGAGAUAUCACUGAAUUUCAACACAAUUUCAGCUAUAGCAAACAUUACAAAGUCCAGUAGCGCCAGCCAACCGCCCUUGCAUCUCCUCUAGCACCGUUUGCCCUGCUGCAUCUAUGCCUCCUCCAGCACCGCCGGCCCCUAACAGCCCCUGCGCCAACCUUCCCCUUCACGCCUUCCCUUCCCCAGCCGUACUCACCCAGUCCUGAGCUCCCCGUCGCGCCGGACCGUGCAGGCCCGCAGUUGCCGACGGGCCUCCUGACCAAGGUCGCGCCUCUUCUUCGCGCUGCCGCUGCACCUCCCUGCGCACCGGCCAAUGGUUGUCGCUGUCGCGCUGGCCCGCGGUAGAGCCGCGCGGACCCACGGCUGUUGCCGCGCCUCCUGCGUGCUGGCCAACGGUCGCCGCCGUCGUGCUGGCCCGUGGUUGAGCCGCAUCGACCCGCGGUCGCCGCCGCACCUCCUGCAUGCCGGCCAGAGGUCGCCGUUGCCGCGCCCACCCUGCUGUUGCGCCGCCACCGCCACUCGCUUGGCCGUGCUGGAGAUGGGGAAUACACGGCUUCAAUCUGAUUCAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
26.63%
ME_num:
MEP:
65.45%
HE_num:
HEP:
7.72%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.75
Avg Expression:
3.91
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -2.00312941629256 | 3.98938301977824e-10 |
| 2 | Nipponbare // shoot // "Control, 22C for 10 min, then 30C for 50 min"--/--Nipponbare // shoot // "Heat, 42C for 10 min, then 30C for 50 min" | -2.11071437676712 | 0.0237385445960122 |
| 3 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -2.60965646631712 | 1.98417551745685e-06 |
| 4 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -1.42467241541846 | 0.000415424268303904 |
| 5 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | -1.11780146464959 | 0.047726762052314 |
| 6 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -1.46111804484862 | 0.0237369765856271 |