Chr:
Chr10
Start:
15671118
End:
15672235
Strand:
.
Ref_name:
OSA-LNCN1202
Sequence
(OSA-LNCN1202.1):
UUAGAAUUUACAUUGUAAAUACACUAAAAUUACAUAUGUAAUUUAGACACUUACAUUUAAGUGCAUACCGACUAUUUUUUUUACACUUACUGUGAGUGGUCCCCUACUCCAUAAAACUUCCAAAUUCAUCUACUCUGUCCGUCUGUCGUCGCCGAGGUUCUGCGCGGGCUUGGAGCUCGCCGACCACGCUGCCUAGUCCGACGAGGAAGGGGAGUAGCCGGAGCACAGGAAGAAACGGUGGGGGCUGGUCGGGGGCGCGGCGACGCCAAGGAAGGAGUGGGUGGUGAGGGAGAGCCACCAACGGAAGAGAAAGGCACGACGACCGGUGGCAAGGAGAGCCGGGGUCGCCGCCGUGCCAUCUCCUCGUCGCCACGCUUCUUUUCCGUCUCCGCGCUCCGUCUCCUUGUUGCCGGCUAAGAGAGGAGGGGCCCGGCGCCGCUCCAGAUCCACGUCGCCACCGCCGUCCUCCUCGCUCCGUCUCCUCGUCGCUGCCGAGAGAGGAGGGGCCUGAUGCUGCUCCAGAUCCGUGCCGCCGCCGCCGUCCUCCUCGCUCCGCCUCCUCGUCGCCGGCCGAGAGAGGAAGGGCCCGGCGCCACUCCAGGCCCCCGCUGUCCUCGCUCCGUCUCCUCAUCGCCGGCGCGACGACGGCAACCACCACCACUGCGCGCAAGGCGCUGUCGAGCACCCCACCGUUCUACUAUGCGCAUGGCGUCAUGUAGACUGGAGUCCGCCGUGUGGAGGUGGUCGCCGGCCCGGCGCCAAGAAAGGGGAAAGUGGGAGAGAGAAUGGGAAAGUAACAGAGAGAAUGGGUUGGGAUGGUUGGUUUGGGGAUCCCGUGUAGUAACUGUGAGAGGUAUGGAUUCGUUGUACAUUUAUCUUAAGGUAAUUCAAAUAAAGGACUUGCACUGCUACUGCCUAAAGCACAGUGCCUUAGAGUUUUUUUUUAGGGAAACAGUGCCUUAGAGUUACUCACACAGUGCGACGAAUUCUCUCGACGUUGGCAAGCAGCGCGAGCUUGGAUAUGUUGACGUCUGCAGUUCAUCACUCAUUCGUUAAUGCAUGUUUCCCAUAUGAACUUUAAUUAGCAUGAAUCAUUUCAACAGAAAAAUAGAGUAGAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
78.66%
ME_num:
MEP:
8.54%
HE_num:
HEP:
12.6%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
crown
Tau :
0.95
Avg Expression:
14.49
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | 9311 // leaf // control--/--9311 // leaf // salt | 1.53753532728757 | 1.71329548355824e-23 |
2 | 9L136 // leaf // control--/--9L136 // leaf // salt | 1.33862020430718 | 1.73215303126711e-07 |