Chr:
Chr10
Start:
14278594
End:
14283708
Strand:
+
Ref_name:
OSA-LNCN1175
Sequence
(OSA-LNCN1175.1):
ACAGUCAUCAGCCGUGUAGAUGAAAUGGAGAGUAUGCAAAUCACCAGUCGCCCUCAUAGAUCACACCCAUGUCUCAUCUCAUCCUCAUCAUCUUGCAGAUGCAAAUGUAUCUAGCAUCGAUCCUAGCUAGCUAAUUAACCUAAUCUUCCUCCCCAAUGAACUUGCACACACUGCAGUAGCAUCAGUGAUCAGUGAUCGAUCAGCUUCUGCUGGGCCCCUGCAUAUGUCUGUCUUUGAGGUAGCCAACGCGGUUACACUUUUACUAGCACCAACAACCC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
24.59%
ME_num:
MEP:
75.2%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
callus
Tau :
0.69
Avg Expression:
4.11
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 1.32398540065498 | 0.000810149141918658 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -2.45163947409924 | 0.00557117374307935 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | 1.38881700429687 | 0.00163893210884851 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | -1.28651641779705 | 0.0294026030221024 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -1.49459835691168 | 0.0128560074527631 |
| 6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -2.44525707396468 | 7.64399982952421e-05 |