Chr:
Chr10
Start:
13959247
End:
13960106
Strand:
-
Ref_name:
OSA-LNCN1158
Sequence
(OSA-LNCN1158.2):
GGUUAGUGUUGGCAUAUAAGUAACCAAGGUACGCUAAGUCUCUGUUUGUCACAACAGGCUAACUUUCGAACAAAAUGAAAUGGAUGUCCUUAAUUCAAAGGAGAGGUAUGUUAGCUUCACAUGUAGGAUUAGGAAGCAUCAGGAUAUCACUACAGUAAAGAUUGAAGUGUAAUUUUUCAGGUGGCUACCAUUAUAGUGAUUAUUUGAAGUAGAGAUUAUCCAACUACAGUCCCAUUUACUAGAAUGAUAUAGAACGGAGGGCUUCAUUAUAUCCCAGUAUAACUUCCAUUCAGAACUCUUCUUGCGACUGGGAUGUCAUCAAUGGUCUGCUAUUUCAGUCGCAAACUCUGUGUUUGCUAUACAAACAUUUGGCAUGUUUCAAGAUAACCUGACAACAUUUUGCUGCAAGUCAUCCACAAACUCAGAUCUUUUCCAUGGUUUUCUUGAAGAUUGCUUGGUGGCCAGUAAUGUUUGAUUUUGCAGUAGUACACUUUGCCUGAAACAGAAAAUGCAGCAGUAUACUGGUUAAUCAUAACAAAAGAAAUCCCCGU
Sequence
(OSA-LNCN1158.1):
GGUUAGUGUUGGCAUAUAAGUAACCAAGGUACGCUAAGUCUCUGUUUGUCACAACAGGCUAACUUUCGAACAAAAUGAAAUGGAUGUCCUUAAUUCAAAGGAGAGGUAUGUUAGCUUCACAUGUAGGAUUAGGAAGCAUCAGGAUAUCACUACAGUAAAGAUUGAAGUGUAAUUUUUCAGGUGGCUACCAUUAUAGUGAUUAUUUGAAGUAGAGAUUAUCCAACUACAGUCCCAUUUACUAGAAUGAUAUAGAACGGAGGGCUUCAUUAUAUCCCAGUAUAACUUCCAUUCAGAACUCUUCUUGCGACUGGGAUGUCAUCAAUGGUCUGCUAUUUCAGUCGCAAACUCUGUGUUUGCUAUACAAACAGUGAGGCUCAAAGAUUAUAUGUUAAUUUCACCAUAAUUAAUUAUAUAUGUGCAUAUAAAAGUAUUAAGUAUAGUAAAGUUAUUGGCUUCUCUAAUUCAAUUUCUUUCGAUAACAACAGUUUGGCAUGUUUCAAGAUAACCUGACAACAUUUUGCUGCAAGUCAUCCACAAACUCAGAUCUUUUCCAUGGUUUUCUUGAAGAUUGCUUGGUGGCCAGUAAUGUUUGAUUUUGCAGUAGUACACUUUGCCUGAAACAGAAAAUGCAGCAGUAUACUGGUUAAUCAUAACAAAAGAAAUCCCCGUAUAAAAUUCUGAUCAAGAAUCACGAAUGGAAUCGUUAAUCUGUGCAAUUAAUAUCAACUAUAUACUUUUAAACUUCAUGGCUUGAAUAUAUACUGGAGUAUAAAGCAAACAUUAUGUGGGACUUUAUAUCAAAGUUAACUAGCAUUGCUGAAUGCAGGGCUAUAAAUCAAGAAGGCAUUGCAAAGUUUGCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
97.15%
ME_num:
MEP:
2.64%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
spikelet
Tau :
0.95
Avg Expression:
0.43
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | -5.22608108518781 | 0.00226251016380926 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | -5.32197931634532 | 0.00130154234216969 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -5.47217308976869 | 0.000832514414937835 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -4.48753157917393 | 0.0179138423123558 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | -4.72904135190466 | 0.00715348611157622 |
| 6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | -4.89545601113141 | 0.00533026214860687 |
| 7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | -5.57899959256136 | 0.000570155475599075 |
| 8 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -5.28397192282564 | 0.00105642536918625 |
| 9 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -5.75773100068943 | 0.000319885980418714 |
| 10 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA | -5.18228690324295 | 0.0023629874192167 |
| 11 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -5.89085524799022 | 0.000146016448873904 |