Chr:
Chr10
Start:
13535329
End:
13536369
Strand:
-
Ref_name:
OSA-LNCN1150
Sequence
(OSA-LNCN1150.1):
AAGCACCAUACAUCACUCGUUCAAUUGGAUCAUCACCUCCAUGCAUGUUCUCUGGAUAUCAUGAGAUACUUCCUCUCAGCCGGCCCCUCAAUUGGUUUGUGAGGCAUAUAUCUUCCUCGGCUUCGGCGAUCAUAGGUGAAACCAUAUAUGGCGUCAAGAUCACCUUUUUCGUGUUGCCUUUCAUUUUCGGGCAGAGAGGGACAUGUUGGCACAAUAUACACCCCACUGUUUUCAUUUCCCGGCAUGAUCGAGUCACACUCGCCGUCAUCUUCGUCUCCUCAUUGUGCACCUCACCGUCAUCAUUGAUUAGGGCAUGAGCAACGGGGAACACAACGUCAUGCCAAAAAGCGAGGCGUCGAGCUCUCCAGUGCUGAACGACGAUCCCCUUCAACUAUCGUCGGCCUUGUCAUUCCACCACAGUGUAGAUUGUCUCGGAGCGGCGUAGAUUAGGUGAGCUCAGAGGCAGGACGUGUGGAUGGGACUUGAAGCUCGGCAGGAGUACGGAUUGGGCGCAGAUAGGGCUAGCAGCGGCGUGGAUCGGUCACGGAUCCAGCCGAUGAUGGUGACAAGCACGACAGGAAGCACCUCGAGGCGAUGACAACCACAAUGGCCGACGAGUUCCUGGUUCAUCCUUUCUAGCAGUCAAGUGUCAUUCCUCUAUGGAGGUUCGAGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
88.82%
ME_num:
MEP:
9.55%
HE_num:
HEP:
1.42%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.98
Avg Expression:
12.43
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // No_DIS;Fr13_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 1.6221930187362 | 0.0186299981763537 |
| 2 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 5.44692065546623 | 0.000112233684185035 |
| 3 | Nipponbare // shoot // "Control, 22C for 10 min, then 30C for 50 min"--/--Nipponbare // shoot // "Heat, 42C for 10 min, then 30C for 50 min" | 5.84435484036154 | 0.0251652625084626 |
| 4 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 4.57331597295022 | 0.0212136356652902 |