Chr:
Chr10
Start:
13287579
End:
13289106
Strand:
-
Ref_name:
OSA-LNCN1146
Sequence
(OSA-LNCN1146.2):
AUAUCUACAAUUUAUUUCAUUCCAAAACUAAAUAUACACAUGCUAAAUCAUCAUUCCCAAUAUUUCAAUUGACUAUAUUUAAUGAAAAAGCACAAUCUCAUGUUGGCUCUGUUCAAAAAACAUUUCAAUCCAAAUCAUUUCAUCAUUUCUCCAAUAUCUAAUGUAUAUUUCGCAGCAAAGCGCGAGGCAUCAUCUAGUUCAUAAAAAAAUUGGACCUGUUUGCCCUUUUUCCUUUCUCCUCUCUUUCCCACCGGUGGAGUGGUGGGUGGUGGGUGGUGCUGCUCACUAUGGCAAGUGCCCCCUACUUACUAUGGUCAUGCAUGUAUGGUGAGGUUGGGUCCUGCGGUUCCUUUCUUUUCCUGUCCCCCCUUUGCUCACUCCGGUGGUGGAACAUGGCAAGGUUGGGGCCAGAAGUUUUGUCUCAUCCUGUAUCUCAUCUAUCUCUUCCUCCUCUCCACUCCGGUGCAUGCGCUAUAGGAGGAGGAGUGGGGGAAGCACGUGAUGGCACUGAGGAGAAAGAGG
Sequence
(OSA-LNCN1146.1):
GAGGUGACCCGGCGGAGAUGCGAAGGUAGAGAUGGUGGAUGGGUUCAUUGGAAAUGGACGAGCGAAGGGAGGGGAAGGAGAAGGAAGAAGGGCAAAAUGAUCCAAAAAAUUUUAGAGUUAAUUGGAUCCAUACCAUUGCAAAUAUGUCGAUUCAGAUAAAUGGCACUACAAUUCAUCUAUUUGUAUCCAUGCCAUUCGAAUACACACAAAAUUGGAACCAUGCCAUCGCCAUCAUGUUUUCCGCCAUCAUAUAGACCAAAAUACCCCUAGAUGUGAGACCCAUAUGUGUUCCAUCUUCUUCCUUCAUUCUUCCCUCUUCUUACUCUUCCCCAUCUCCCCUGAGCCAAAUGUGGUAGGCGGCGAGGACCACUCAGCUGCAUCCACAUUGUGGCUACCUCAGUAUAGCUGAGACCGAUCUUCUCCCUGUCCUCCUUGUCAAGCUUCCAACCCAUCGCCGGUCUCUUCGAGUUUUUGCCUUGUUGGGUUCCUGCCCUACCACUGCUAUCCCAUCGUCCUAAUUGACCUCCUGACCAAUCGUCAUUGCCGUCCCAUCCUCGUCAAGCUCCCGUCCCAUCGCCACCAUCUCAAGCCACCUCCCAGCGCUGCUGCCCGACUGACCUUGCCUUUAGCUCCUUCUCUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
87.2%
ME_num:
MEP:
12.2%
HE_num:
HEP:
0.41%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
panicle
Tau :
0.89
Avg Expression:
1.36
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 4.30826243727002 | 0.0108970208212607 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | 4.80628918775052 | 0.00509508436687296 |