Chr:
Chr10
Start:
9197594
End:
9201030
Strand:
-
Ref_name:
OSA-LNCN1075
Sequence
(OSA-LNCN1075.1):
GACAGAUCCGAGCCAGCCGGGUGCACGGCUGCCGCCGCCUCCUCCUUCCAAAUCCGAUCUCCCCGUUGUCCUCUUUCCAUAUUAGUUGCGGGAAUGGAAUCCUCUCAAUCUGCUCUACAAUUUCCCCAAGAAAUCCCCAAAAUUUUCUAUGGAAAUCCAUUCCAAUUUCGCGAAUCAAUCUUUCCUUACACCGGCGAAGAUCCUAAACUUUUCCGGAGCUUUUCCCGUCGAUGUGGGCUCGAUCCCGGACUCCCAUGGCUAUAUAUAGAGCCCCCUACCUCUCCUCUUUCGGCCGCCACCUCUCCCUCUCUCCGCCGUCGGCGGAAACCUUCUCCCCGCGAGCGCCUACUCUCUCCGUCGCCGGUAGCCGCUCCAGCCGCCAUGCGCUGCCGCCUCGGUCGUCGCCGCUCUGCGCCGCCACCUCCCUCGGCUCCGCAAAGUCGAGUUCUACCCCGGCCGCUGGUUAUUUUGCGCCAAAAUCCACCGGAGCUCCAUCGUCGCCGUCAACCCGAAGUUCACCGUCGCGUUUUGAUCUCCGGCGAGGCCCUGCUGCUCCUCCCGUCAUCGCCAAGCUUCACCGCCACCUUUGUUGGAUUCGCAGCUGCGAGGAGAAGCCCGUCCGUCAUCUGUCAUCCACCGAAGAUCGCCGGAAAGUCGUCGCCUUCGUUGACCAGAACCUCGCCGCCCUUCGGAGCUCAUCGCCGGUCAUCUCCUUCGCUGUCCGUCGUCGCAUAAGUGUUGUUGAAGAAAAGUUGCGAAGAAGAAGACGUUUGGCUUAUACCCCAGUUGAGCUGCCUGUGGGAGUGGAGCCGGAGCUUCGCUAGACCGUAAUUCCAAUGUUGUUUACUUUUCUUUUGUAAGUAUGUAAUGUUAUUAUUUUGAUGAAUCUGUAUAUUAAAUUGUCAGUUUGUGUAUCUUGGCUGAUUCCUGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
51.02%
ME_num:
MEP:
47.97%
HE_num:
HEP:
0.81%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.89
Avg Expression:
3.32
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | 1.1626470980324 | 0.0255656858054978 |
| 2 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | -1.76904207709977 | 0.00306666183785224 |
| 3 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | 3.06353936000346 | 0.000101225564406293 |