Chr:
Chr10
Start:
7620747
End:
7621369
Strand:
.
Ref_name:
OSA-LNCN1045
Sequence
(OSA-LNCN1045.1):
CACAGCAAAUCAUUCACAACAUUAUCUCAGAUCAAACAUUCACAACAACAAUAUAGUUCAUCCAAAUCAUUCACAGCAAUAGUUCAUCUCAAAUCAUUCACACAAUAGUUCAUCCCAAAACAUUCACAACAACAACAACAUAGAUCAAAUCACACAUUCAACAUAGAUCGUAUCAAUCAACACAGAGCGAAUCGCACAUUAAGGAAAAAAAGAAAAAAAAGAAAAAGAAAUUCCACGGUAGCGCCGCCUCCACCACCUGCCGCCGCACCGGCCUCCGCGCCGGGCGCAGCCCUCCGGACGAGGCCACCGCCCGGCUGCCUCCCCCUUCAGAUCCGGCGGCAGCCGGCCGCUUCCCCUCCGGAUCCGCCGCCGCCCGGCUGCCGCGGCGUGAGGCCGCCUCCACCCCACCGCGCAAGGGGCCCGCCGCCGCCGCGGCGCGAGGCCGCCUCCGCCUCCGCCCGGCCGCUGACGGAAGAGAGGGGAGGAAUAGAACGGGGAGAGGAGGAGGAGGAAGAGAUGGGAGGAGGAAGAGAGGGGAGGAAUAGAACGGAGAAGAGACGGGAGGAGUAAGAGAUAAGGUUAGGGAAGAGAUAAGAAUAGAAUUUAUUAACUCCUCGAUCUCG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
78.25%
ME_num:
MEP:
11.38%
HE_num:
HEP:
10.16%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.79
Avg Expression:
27.01
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 17.5h | -3.30869070527681 | 0.0254168996722666 |
| 2 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 9.64552579354516 | 3.80009515800141e-15 |