Chr:
Chr10
Start:
7241370
End:
7242057
Strand:
-
Ref_name:
OSA-LNCN1040
Sequence
(OSA-LNCN1040.1):
UCGGCAUCCACAUCAGCCUACUCGACCACCACACGAGAACCAUAAUGAAUUUGGAAGAGGCAAUGGUUUUGGGUCUUCAGUAAUCUCAAUUUCAAUUAUUUUUAAAGUUUAGCAGGGCAUGACCAGAAAAAUGGUUUUCUGAAUGUUCUUGCAAGAACCUGCAACAUUCUCUUUUGUUCUUUAGAUUUUUCAUCUAUCUUUUGUGUUCUUCAAACGUAAUUCCCUGUCGGAACAAGAUUUGGCGUUCAUAUGUUUGUACACAUAUAACAUAUCUCAAAAUUAUCGACCUGAAUGUUCUGGUUUGCCACAUGCAUACCACUGUACUAUUGACUAUUUAUGAAUUAUCUGGAUUUUGCAUUUUAAUUAUGUAUGCUGAUGGUUCCCUUUGCUCAAUCUCAAUUCCAACAGUCACAUGCUAAGUUCCUAUUGAAUUAAAAAUGUAAAUCUCUAUAUCUUCUCUGGUAGGCCAUCAGAUAUUUUAACACAACAAAGAUGAUUUACAAUGAUAUGAACCAAAUAUUAGUUCGAGUAUACAUACAUACAUCUAAAGUUAUAGAGGUUGAAACUUGUGAUGCAUUGCUUCUGAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
93.7%
ME_num:
MEP:
6.1%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.94
Avg Expression:
0.67
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 5.20269232993915 | 0.00013335929589687 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | 5.09200130300744 | 0.000313351452299024 |