Chr:
Chr10
Start:
5116207
End:
5151811
Strand:
-
Ref_name:
OSA-LNCN0995
Sequence
(OSA-LNCN0995.1):
GGGGGUCGCUGGGGAGUCCAUGCCUUGUUUAUAAGGGGGUGAUUAUGAUCCAGGAAAGGUGCACUGUGGUGAGUUGUGUUAUGCGAGGGAUAUUGUCACAAUUCCUUUCCGAGAUACCGUGGUGGUACUGAGGCACAUGGUAACAUGAUGUGGGGUUGUGUCUUGUGGGUACAGUGGUACACCUCUGAUCAGAGUUUAAACUAUUCGAAUAGCCGUACCCGCGGUUAUGGGUGAGUUGAGCAAUGUUUUUCGUGAUUAGU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
92.68%
ME_num:
MEP:
5.69%
HE_num:
HEP:
1.42%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.90
Avg Expression:
0.72
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 10.5h | 2.545527156421 | 0.0326495309442449 |
| 2 | 9311 // leaf // control--/--9311 // leaf // salt | 6.41017000436367 | 3.08116551857746e-06 |
| 3 | 9L136 // leaf // control--/--9L136 // leaf // salt | 5.53397575706157 | 3.1785576448283e-06 |