Chr:
Chr10
Start:
3510704
End:
3511057
Strand:
.
Ref_name:
OSA-LNCN0970
Sequence
(OSA-LNCN0970.1):
GUCAACUGUUUUAGGUGCUCUGAUAAGCUGAACAUGAUUUUUGAGUAUGAUCUGGGUUGUCAUUUGUAGAGAGGUUGGAGUUGUUUCCGUGCGAUGAAUUCGGGUGGUAUUUGGACCAAUUGUGUUGGUAGAAUCGUUUUACUGAGUUUUUCUUCCCUUCUUUUGAUGGGUGGCAGCUUCUCAUUGUAGGUUACAUUUGUGUGUCCUUGGCAUGGCAGAUUUGUGCUAGUAUAUUUGUGGAAUUGUUUGGCUGCUAUAAUUAUAAUUUUUGGUGGUUUCAUUUUAAGUUGGUUUUGGAGAGGCUGUGUAUAGAGAUUUACUGGGUUCGUCUGGAAAGGUUUUAGUAGGUUGGAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
96.14%
ME_num:
MEP:
2.64%
HE_num:
HEP:
1.02%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
panicle
Tau :
0.99
Avg Expression:
7.57
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | -4.29582519107375 | 0.0427889299643179 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -4.61148275735961 | 0.0202465401913044 |