OSA-LNCN0868


Function Link


Basic Info

Chr:

Chr1

Start:

40423547

End:

40424974

Strand:

.

Ref_name:

OSA-LNCN0868

Sequence
(OSA-LNCN0868.1):

GAGGAAAAGUGAUGGUCAUGGCAUCUAACAAAGCAAAGUAGCCGGGGUCUGUGGAAUUAGUUGCACAACUUGUGUAUAUAAUAUUUAUGUAAUGACCUGUACUUUUGCUGCUACGUUUACUUAUUACAGGAGUCAUAUCCUGUUUACACUUGCUAAAUUUUGCCACACAGAAACAUAAUUUCCCCAUGAACAAAAUUAAUGGAUCUCUGAUUGGUGAAUCAAUUAAUGGACAUAUGUACUUGGACCUUUUUAGCUGAAAGCUGUCUAAUCAAAAGCAAGCAAAGCAUCUCUUAUUGGCAUGCAUAAUUAAGAUCAUAGAGUUUAAAUCUAUCCCCACCUGAAUUUAAUCCGGUGGUGGCUACAGUUACUGAAGUCAAUUAGCAUAGUGCACAAGGAGUAGUUAAUUAGUUCCAGAGUAAAAUAAAUAUGAUAUUAUACUCUAUCCACCUCUCAUUGCUCUCCUGUCUACUAGCUAGCUCCUAAAAUGGAUGAAAUCCAAGAGAAGUCUGAACUGAAGUCAAGCAUGCACAGGGUCAUGCAGUGGUGAUAACAAUAAUAAGAAAGAGAUGGAGAUGCAGAGAUGGAGAUGGAGACAGAGAAAAGUUUGGUUAUAGCAGCUGGAGAGAGGAGGGAUGAGAUGAGGGGGCCCUCCACCCACCUCAUUGCAUUGCAUUGCUAGCUCACCCUUGCAAUUGGCCUUUUUAUCAUGCAUGUGUGGUGAACAGAGACAAGCCACCUAAAGAUGAGGGAGGAUGGUUGGACCAUUUAGGUCAGGAAGCAUUCAGCAUUUCUGAAUUUUCACCAGCUAUCCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUUCCCAGAGAGUGAUACAAAAGAUAAACAUCUAGUAGCUAAUAGUACACAAGAACAAAGAGAAAAAAAAUUAAUCAUAUGCACAAAUGUGUGUGUAUAUGUGCAUAUAGAUAUAUGUCUGCACUAGUGUCUCAGCACUGGACUCCAAAGGUUGCAAUGAUAGGAAAGGACCAAACAAGCUCAACCCUACUCCAAAGAUAUCUCACUACUGCCUUUCCCCUUGAUUGGCCUACAUGCUUCUGUUUAGCCUUGGAUCAACUCACCCCCCCCCCCUCUCUCUCUCUCUCUCUCACUUUCUAUCCUCUUCAACCUUGCAAAUGAAAUGUGUGGCAAAUGGCACUAGCUACCCAUGGGGGCCUCCUCAAGCUGAUAUUUAGGCAGCAGCAGCAGUGUAGUGCACCUACUCAAGCAGAUGCAUCAGUUUGCAUAUGCAACUCUUGCUGGUUUGGACCUAAAAGGAGGGAGCUAGCAAUGGUUGCUGCUUGACCUGCAUUUUUAUUUCUGCAGUUCCAACCAUAUGCAGUGCACCUCAUAAUUAGCACUGGUUAGAGAAGGAGACCUUUUCCAUCUGCCUGCAGUCUC


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

469

LEP:

95.33%

ME_num:

16

MEP:

3.25%

HE_num:

6

HEP:

1.22%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

leaf

Tau :

0.86

Avg Expression:

0.38

Tip: OSA-LNCN0868 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
19311 // leaf // control--/--9311 // leaf // salt4.915779462250527.97685236637843e-37
29L136 // leaf // control--/--9L136 // leaf // salt5.091116339237164.47515410931992e-34