Chr:
Chr1
Start:
40423547
End:
40424974
Strand:
.
Ref_name:
OSA-LNCN0868
Sequence
(OSA-LNCN0868.1):
GAGGAAAAGUGAUGGUCAUGGCAUCUAACAAAGCAAAGUAGCCGGGGUCUGUGGAAUUAGUUGCACAACUUGUGUAUAUAAUAUUUAUGUAAUGACCUGUACUUUUGCUGCUACGUUUACUUAUUACAGGAGUCAUAUCCUGUUUACACUUGCUAAAUUUUGCCACACAGAAACAUAAUUUCCCCAUGAACAAAAUUAAUGGAUCUCUGAUUGGUGAAUCAAUUAAUGGACAUAUGUACUUGGACCUUUUUAGCUGAAAGCUGUCUAAUCAAAAGCAAGCAAAGCAUCUCUUAUUGGCAUGCAUAAUUAAGAUCAUAGAGUUUAAAUCUAUCCCCACCUGAAUUUAAUCCGGUGGUGGCUACAGUUACUGAAGUCAAUUAGCAUAGUGCACAAGGAGUAGUUAAUUAGUUCCAGAGUAAAAUAAAUAUGAUAUUAUACUCUAUCCACCUCUCAUUGCUCUCCUGUCUACUAGCUAGCUCCUAAAAUGGAUGAAAUCCAAGAGAAGUCUGAACUGAAGUCAAGCAUGCACAGGGUCAUGCAGUGGUGAUAACAAUAAUAAGAAAGAGAUGGAGAUGCAGAGAUGGAGAUGGAGACAGAGAAAAGUUUGGUUAUAGCAGCUGGAGAGAGGAGGGAUGAGAUGAGGGGGCCCUCCACCCACCUCAUUGCAUUGCAUUGCUAGCUCACCCUUGCAAUUGGCCUUUUUAUCAUGCAUGUGUGGUGAACAGAGACAAGCCACCUAAAGAUGAGGGAGGAUGGUUGGACCAUUUAGGUCAGGAAGCAUUCAGCAUUUCUGAAUUUUCACCAGCUAUCCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUUCCCAGAGAGUGAUACAAAAGAUAAACAUCUAGUAGCUAAUAGUACACAAGAACAAAGAGAAAAAAAAUUAAUCAUAUGCACAAAUGUGUGUGUAUAUGUGCAUAUAGAUAUAUGUCUGCACUAGUGUCUCAGCACUGGACUCCAAAGGUUGCAAUGAUAGGAAAGGACCAAACAAGCUCAACCCUACUCCAAAGAUAUCUCACUACUGCCUUUCCCCUUGAUUGGCCUACAUGCUUCUGUUUAGCCUUGGAUCAACUCACCCCCCCCCCCUCUCUCUCUCUCUCUCUCACUUUCUAUCCUCUUCAACCUUGCAAAUGAAAUGUGUGGCAAAUGGCACUAGCUACCCAUGGGGGCCUCCUCAAGCUGAUAUUUAGGCAGCAGCAGCAGUGUAGUGCACCUACUCAAGCAGAUGCAUCAGUUUGCAUAUGCAACUCUUGCUGGUUUGGACCUAAAAGGAGGGAGCUAGCAAUGGUUGCUGCUUGACCUGCAUUUUUAUUUCUGCAGUUCCAACCAUAUGCAGUGCACCUCAUAAUUAGCACUGGUUAGAGAAGGAGACCUUUUCCAUCUGCCUGCAGUCUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
95.33%
ME_num:
MEP:
3.25%
HE_num:
HEP:
1.22%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.86
Avg Expression:
0.38
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | 9311 // leaf // control--/--9311 // leaf // salt | 4.91577946225052 | 7.97685236637843e-37 |
2 | 9L136 // leaf // control--/--9L136 // leaf // salt | 5.09111633923716 | 4.47515410931992e-34 |