Chr:
Chr1
Start:
35913561
End:
35914491
Strand:
+
Ref_name:
OSA-LNCN0783
Sequence
(OSA-LNCN0783.1):
GGAGUUAUCAAGGUACACAAAGAUCAAUUUGGUACUACUCCCUCCGUUUCAGGUAAAAGAUGCAGUCCAUGUAUGUAUAAUUUCCUGGACGAGGAGUUGUGCUUCUCCCAAAGGCCUUGAUGCAAACGUAAGGUGAAAUUGUGCGCGUCGUCAGAGUACAGGCGAUCUGGCUGGGUUUUUUUUCUCUCCUCCGGAUCGUACACACCGCGCGCAUUAUUAUUGGCGUACGUACUCGAUCGACCGCGAGCGCGACACGCACGGGCGAGCGAUCGUCGUCAGCCACUUGGGAGUUGUACCGAGGGGGAGCGAGAGCGAGAGCGAGACGCGUGCCGCGUUGGCCACACAACACAGGUAUACGCAGGUACAUUAGUAGCAGACUAUAAAACAACUAUAAACAUAUUUCGACAAAGAUAAAAUAGUAUAGAGAAAAACAGCGGGCUACAGAAUUACUAUAGUACGGACUUCAAAAUAUAUGUGUGUAUGACAGGUAGGAUCAUGUAUUAAUUAUGUAGCAUAUUUUUAUAAGUAACUAUUGUAUGAAUUGACUAUAGAUGAUUUAAAGUCAGUAGAUGGGUAUACUAUUAAAUUUGCUCUUAAUACUACUCCCUCCGUCUCAUAAUAUAAGAGAUUUUGUCAUUUUGCUAGCACUGUUUGAUUACUCGUCUUAAAGUACUUUGGAUAAUAAAGUAAGUCACAAAUAAAAUAAAUAAUAAUUCUAAAAAUUUUAAAAUAAAAUGAAUGAUAAAACAGUACAAGUAAAAUAUUAAAAUUCUUUAUUUUAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
67.48%
ME_num:
MEP:
23.17%
HE_num:
HEP:
9.15%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.94
Avg Expression:
3.63
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 1.7790044659059 | 3.38930768068368e-06 |
| 2 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_BLS256 | 2.3468499390925 | 7.76213565037145e-05 |
| 3 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP2286 | 2.75901539321645 | 0.00720003976775997 |
| 4 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_BLS279 | 2.56735473917356 | 5.42276432478592e-08 |
| 5 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_L8 | 2.62508090317698 | 6.19638152020054e-05 |
| 6 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_B8_12 | 2.81785606985124 | 5.88763566049708e-12 |
| 7 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_RS105 | 3.265081272637 | 6.84960355183574e-09 |
| 8 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7341 | 2.51755438524797 | 2.55035876517903e-06 |
| 9 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7331 | 3.20121592236005 | 5.45011916329516e-07 |
| 10 | Nipponbare // leaf // "wild_type,control,2"--/--Nipponbare // leaf // "wild_type,drought,2" | 2.43697127516821 | 0.00138863936347603 |
| 11 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7342 | 2.7326752541792 | 2.11039815007429e-06 |
| 12 | Nipponbare // leaf // control--/--Nipponbare // leaf // drought | 2.43688759599266 | 0.00143302317713426 |
| 13 | Nipponbare // leaf // "wild_type,control,1"--/--Nipponbare // leaf // "wild_type,drought,1" | 2.43679263400276 | 0.00139676815829006 |
| 14 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -2.89683328116449 | 0.0188287069505693 |
| 15 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 1.84688104831429 | 0.0143784539563428 |
| 16 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -1.57481367598092 | 0.0246111534867698 |
| 17 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | -3.06992147718523 | 0.000360425741598746 |