Chr:
Chr1
Start:
34657797
End:
34658022
Strand:
.
Ref_name:
OSA-LNCN0759
Sequence
(OSA-LNCN0759.1):
GGAGAGAAAGGCUCUCGUCAUCAAGGUCGCUCUGCCGCCGCUCCACCAAGAAGGUUCGCUACUGCUCUCGUGAAUCCCUUCCGGCGCUCGCUGCCUACUAUACCCUCGUUGCUCCUCUUGUUCCGCUCAUGCCCCCGCCAAGCUUAUAUCCCUUGCUCCGUCCAAUCACUCCCACCGCUCCUCAAGCUUUGCUAUUCCCCCGCUCGCUGUGCUCUUCACCUCUGCG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
90.04%
ME_num:
MEP:
9.15%
HE_num:
HEP:
0.61%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.90
Avg Expression:
1.80
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 4.82126771161701 | 0.00241108726304952 |
2 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 4.35933823401642 | 0.0441804029732098 |