Chr:
Chr1
Start:
32460422
End:
32461607
Strand:
+
Ref_name:
OSA-LNCN0715
Sequence
(OSA-LNCN0715.1):
CGCUUAGUAAUUUACCACUAGAGAGAAGUGAUUCCUUAACUAUUUCCUACUUUUGCCUACGUGGAAAGCGACGUGGUCCCCACCCGUGAACCCCUCCCUUCUCCUUCUUCUCCACCUUCAGCCUUCGCACCCCCUUCAUCUUCGCCCUGAGCUGGCCCAGCUCAACUGCGAGUGCCGCCACCACCGUGGUCUCCUCUGGCGCCACGUCCCCGAGCCUCACGUCCUGUGCCACCGCUGUCCUGGUGAUGAGCGUCAGCAGCAGCAGCAGCGCCGUCAGUGCGCGUGCGCCUCUCGGCCUGAGGAAGCAGCGGUGGCCCCAUCGGCGUCAUGGUCGUCGUCCUCCUCCUCGACGGCGUCCUCUGCCUCCUUCUCAGGAAGCUUGCGCAAGUGAAGCAGCUUUGACGGCGGCAAGAACCCACGGCCGCCUCCGCCCACCCCGCCGCGGUGGUCGCCGGUUGCUGCCGCAAGAGGAGGUCGGCGUACAAGCAGCUAUAUGCGGCAAGGCGAGCCGAGGUGGAGGAGAUAUGGCGGCCAGAGGUAGAGAAGAAGGAGAGGGGAGGGGUUGACGGGUGGGGACCACGUCGCUUUCCACGUGGGCACGCCACGAUGGCUCGUUACGUAGACAAAAGUGGCAAAUUGUUAAGAAAUCACCUAUCUCCAGUGGUAAAUUACUAAAUACAAAUCAAAUAGGGGCAUUUAGAUAAGUAACAAAUAGUUAAAUAGCCCGUGGUAACGGGCUAAUCGCCGCCGAAUCUCUCUUCUUCUCCUCCUUCCCUUUUUUUUCUUUAGUUAUUUUCCUUCUUCUCCAUUCCCGGCCAUGUUCUUCAAUUCCUGUCCGGCUCAGUACUUUGUGACACGGAAAUCUGCUCUUGUAAAAGUUUAGGACUGUUUAUCAGAAUCUGGAGUUUUGGACACAAGGGGUGGUGGUGCAGUUGGCUAGCGCGUAGGUCUCAUAGCUAUUGAGUGAUCCUGAGGUCUAAGUUCGAUCCCCUCUCACCCCACAAACCUUGCCCUUGCGAUGACGAAAAGCUCUUCGGUGGCAACUUGGGUCGCCACCUUCGUCUGAACUCAGAUGAUCCGAGCACAAUCCGAGCUUCGUUUUUUUUUCUUUAUUUUUUUUGAGUUUUUCUUUCCAGGUUUCUCGAUCUAACAACCAUCUGCCACCUGGCCAUGAUCAGUCGCGUCC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
82.32%
ME_num:
MEP:
16.87%
HE_num:
HEP:
0.61%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.88
Avg Expression:
1.76
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 1.9178105441238 | 0.0267980304468222 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | 2.32077532998355 | 0.00753274514748527 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | 2.83834271580322 | 0.000656448166905146 |