Chr:
Chr1
Start:
31638550
End:
31651089
Strand:
-
Ref_name:
OSA-LNCN0699
Sequence
(OSA-LNCN0699.1):
AUUGGUUUCAACAUGACAAACUUCAGGACUACUACAUUUUAACUUUAAUCUAGGAGAGUGCUAUAUAGUUUGCAUAAGGUUUGUCAUCACACUCAUUCCUUGAUGUUAUUAUAGGAUGGGGCUAUUAAUUUUGUGCACUGAAGACACUUAACAAACAUAAUGCCAAAAGCCUAAGGAAUGUGUCACGUUAUAUUAGCAAGGCUUUGUCCGUAUAGAAUGUAAAGGAGUUGAAACAUAAGAAAUCCAACAUGUUUGGAAUUGUUCAUCUAACAAACAAGUGUCCAAAAUGACCAGGGAACAAUGAAAAAUAUGCUCUAAAGGAGUUGGAAACAAGGACUACAAGUCUGCAAUAAACAUGGAUUAAAGCUGUAAGCGGAAUGCCCACUGCAGCAAAGAUGAAUUGAAAUAAAUAAUGUGGGACAGUCCAUUUGGUAGACAAAGGAAUGCGAAUUCAUAAUUACAGUUGAACCGAUUGUUUUCAUGUAGGACUCUAAAUUAGAGCCUGGUCCUCAACUUAUUAUACUUAGGUGUUGAUGAACAAUAAUACAUCUCUUGGUAGCACAGCUACAACUAACAAACAUCUCAUCCUAUUACCACUUAAUAGUGCUUGAUGUCUUUCUGAUCUGUCCAAACCAGCACCUAAUCUAUUCCACUCUACAGUCCAGCAACAAACAAAUGCGCUCCAUAACUCAAAGCCAAUGUACCGCCAUUGGAAAAGCAGUUAACGGGAUUGAGAUCAGGGAGAAAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
0.2%
ME_num:
MEP:
11.99%
HE_num:
HEP:
87.6%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
callus
Tau :
0.74
Avg Expression:
49.08
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 17.5h | -1.19894179799499 | 0.0214933797739771 |
| 2 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 10.5h | -1.10067507490249 | 0.00536883797495404 |
| 3 | 9311 // leaf // control--/--9311 // leaf // salt | 1.25946479654903 | 0.0491076459991906 |
| 4 | 9L136 // leaf // control--/--9L136 // leaf // salt | 1.19468932365805 | 0.0083989971884892 |