Chr:
Chr1
Start:
30592526
End:
30599264
Strand:
-
Ref_name:
OSA-LNCN0673
Sequence
(OSA-LNCN0673.1):
GACACGUAUGAUCCCCUAGAUCCUACGUACACUCAUCUAAGUUUCCGUCGAUCUGCACACAUUAACAACCGGUUCCCCUACGACGCAGGCAGAGCCAACGAUCAAGUGUUAGGAGAAGGGCAGCAGUUGACUCGGCUACAACGACAUAACUGUUGUUUAUAUGUGGCCCAAGAGGCCCAAACUACACCCCUAACAUACGCGUUUUACUGCCUUCUACGCUUGCUCUACCCCAAGUAUAUAUUGUUGUUUUUUAAGGAAAAAAUAUUAGUUUUUGUGUAUGGUUGGAAAGACACAACGUGUAUUAACAAGCUAGGUUGUACAAGGAGGGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
0.61%
ME_num:
MEP:
25.2%
HE_num:
HEP:
73.98%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
callus
Tau :
0.67
Avg Expression:
27.12
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | -1.04277272477424 | 0.0170615514165772 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hA | -1.11185146315865 | 0.0218549390672455 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -1.55443657483849 | 0.000559901437707201 |