Chr:
Chr1
Start:
26531008
End:
26531595
Strand:
-
Ref_name:
OSA-LNCN0583
Sequence
(OSA-LNCN0583.1):
UUAAUCAGUGAAAGAAAAGAUGGGUUUAAGCACGAAUUCAAGGUGGUCUCGGUGCAUCACCAGCUUUCAGCCUUUUAGCAAGGAAAAACCAGUAAACUGAAAUUAACAGCAAUGAUUUGUAGUCUAUUUGUUUCAUGAUACUAAACCCGCAUCUGCCGCUACACAACCACUCAAAGCUGAGAGCGAAAGGUGCUGAAUAAAGGUAACAAAUAAUCCAUAGGAUAUAUUGAAGGAAAUCAAUUUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
58.74%
ME_num:
MEP:
34.76%
HE_num:
HEP:
6.3%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.92
Avg Expression:
9.20
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 1.26035477149145 | 0.0297436981208565 |
| 2 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 10 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 10 min" | 3.87465075415688 | 0.0276586701300142 |